| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi1g65197.1 |
| Family | CBM43 |
| Protein Properties | Length: 487 Molecular Weight: 52451.7 Isoelectric Point: 6.8267 |
| Chromosome | Chromosome/Scaffold: 1 Start: 64251507 End: 64254434 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 373 | 452 | 2.7e-25 |
| WCVVDNNKDMSSISSSFSAACSNADCTALSPGGSCAGVGWPGNVSYAFNNYYQQHDQSEESCTFNGLGLITTVDPSVDNC | |||
| GH17 | 33 | 352 | 0 |
| VGVNWGFASSHPLPAEQVVHGLLLPNSVTRVRLSAASPDALSALAGTGVAVTVGVPNELLRPLAASRKAAAAWVHDNVTRYASAVLFEYIAVGDDPFLLN HGQQFQPFVVHAAANIQQALDDAKLSKKMKVVVPCSSDAYQNTSTLPSKAYFRPDVNKTMVELLQFLANHSSPFMVELNPILSFQQKKNISLEYYTFQLM SHPIIDGHNKYENYFDASIDALITALTKAGFSDMGIVVGRAGWPTDGAANATPAIAQSFMTGLVNHLARKSGTPLRPKFVPTETYLYSLSDEDQCSIARG TYERHYGIFTFDGQAKYYVN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 487 Download |
| MRPSRQHPMP SQAPALPLLL LLLAVAPPPA AAVGVNWGFA SSHPLPAEQV VHGLLLPNSV 60 TRVRLSAASP DALSALAGTG VAVTVGVPNE LLRPLAASRK AAAAWVHDNV TRYASAVLFE 120 YIAVGDDPFL LNHGQQFQPF VVHAAANIQQ ALDDAKLSKK MKVVVPCSSD AYQNTSTLPS 180 KAYFRPDVNK TMVELLQFLA NHSSPFMVEL NPILSFQQKK NISLEYYTFQ LMSHPIIDGH 240 NKYENYFDAS IDALITALTK AGFSDMGIVV GRAGWPTDGA ANATPAIAQS FMTGLVNHLA 300 RKSGTPLRPK FVPTETYLYS LSDEDQCSIA RGTYERHYGI FTFDGQAKYY VNLGQGAKAL 360 KNAPDVDYLP SKWCVVDNNK DMSSISSSFS AACSNADCTA LSPGGSCAGV GWPGNVSYAF 420 NNYYQQHDQS EESCTFNGLG LITTVDPSVD NCLFALAIRT SAASSFHPSL TTLWILVLWF 480 CIYSLA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 8.0e-8 | 398 | 440 | 49 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-20 | 372 | 454 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-49 | 34 | 352 | 320 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF95444.1 | 0 | 33 | 485 | 35 | 487 | Glycosyl hydrolases family 17 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ACF78459.1 | 0 | 33 | 482 | 32 | 481 | unknown [Zea mays] |
| GenBank | EEC75046.1 | 0 | 33 | 485 | 35 | 487 | hypothetical protein OsI_11151 [Oryza sativa Indica Group] |
| RefSeq | NP_001049830.1 | 0 | 33 | 485 | 35 | 485 | Os03g0296500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001130286.1 | 0 | 33 | 482 | 32 | 481 | hypothetical protein LOC100191380 [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 7.00649e-45 | 33 | 353 | 2 | 315 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 3f55_C | 7.00649e-45 | 33 | 353 | 2 | 315 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 3f55_B | 7.00649e-45 | 33 | 353 | 2 | 315 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 3f55_A | 7.00649e-45 | 33 | 353 | 2 | 315 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 3em5_D | 7.00649e-45 | 33 | 353 | 2 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
