Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi2g18420.1 |
Family | CBM43 |
Protein Properties | Length: 488 Molecular Weight: 52407.8 Isoelectric Point: 6.2436 |
Chromosome | Chromosome/Scaffold: 2 Start: 16339662 End: 16343911 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 369 | 448 | 1e-24 |
WCVANPAQDLDKASNHLKLACDMADCTTLYHGGLCNGIGEKGNISFAFNSYYQMQKQDAKSCDFDGHGMITYLDPSMGEC | |||
GH17 | 29 | 348 | 0 |
VGVNWGTLSSHRAPPPVVVDLLRANRIGKVKLFDADPGVLSALARSGIQVMVGVTNGELAGIAGSPAAADAWVAQNVSRYVGRAGVDIRYIAVGNEPFLT SYQGQFLSYVIPAMTNIQQSLVKANLANYVKLVVPCNADAYQSASVPSQGVFRTELTQIMTQLATYLSSNGAPFVVNIYPFLSLYQNSDFPEDYAFFEGS THPLVDGPNVYYNAFDGNFDTLISALSKIGFGQLPIAIGEVGWPTEGASSANLTAARAFNQGLISRVMSNKGTPLRPGVSPADVYLFSLLDEEQKSVLPG NFERHWGIFSFDGQAKYPLN |
Full Sequence |
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Protein Sequence Length: 488 Download |
MAACSTVLAF LLALSCVRER RFLAANAAVG VNWGTLSSHR APPPVVVDLL RANRIGKVKL 60 FDADPGVLSA LARSGIQVMV GVTNGELAGI AGSPAAADAW VAQNVSRYVG RAGVDIRYIA 120 VGNEPFLTSY QGQFLSYVIP AMTNIQQSLV KANLANYVKL VVPCNADAYQ SASVPSQGVF 180 RTELTQIMTQ LATYLSSNGA PFVVNIYPFL SLYQNSDFPE DYAFFEGSTH PLVDGPNVYY 240 NAFDGNFDTL ISALSKIGFG QLPIAIGEVG WPTEGASSAN LTAARAFNQG LISRVMSNKG 300 TPLRPGVSPA DVYLFSLLDE EQKSVLPGNF ERHWGIFSFD GQAKYPLNLG LGNPVLKNAK 360 EVPYLPSRWC VANPAQDLDK ASNHLKLACD MADCTTLYHG GLCNGIGEKG NISFAFNSYY 420 QMQKQDAKSC DFDGHGMITY LDPSMGECRF LVGIEDSSSS AVSSCCRVFC GVLAVWVLMY 480 LRMMGSA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-5 | 173 | 340 | 176 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-14 | 368 | 437 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-26 | 369 | 450 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-72 | 29 | 348 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC84224.1 | 0 | 25 | 486 | 21 | 487 | hypothetical protein OsI_30642 [Oryza sativa Indica Group] |
RefSeq | NP_001061551.1 | 0 | 29 | 467 | 36 | 477 | Os08g0326500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001062739.1 | 0 | 27 | 486 | 23 | 487 | Os09g0272300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001141759.1 | 0 | 25 | 487 | 24 | 492 | hypothetical protein LOC100273895 [Zea mays] |
RefSeq | XP_002459936.1 | 0 | 25 | 487 | 24 | 492 | hypothetical protein SORBIDRAFT_02g017290 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 29 | 349 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 2.8026e-45 | 29 | 351 | 3 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 2.8026e-45 | 29 | 351 | 3 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 2.8026e-45 | 29 | 351 | 3 | 316 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 2.8026e-45 | 29 | 351 | 3 | 316 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |