Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma02g07840.1 |
Family | CBM43 |
Protein Properties | Length: 437 Molecular Weight: 47960.5 Isoelectric Point: 4.7067 |
Chromosome | Chromosome/Scaffold: 02 Start: 6198699 End: 6202475 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 323 | 404 | 1.2e-24 |
WCMFNPDAQDLSKLADNINYACTLADCTALGYGSSCNNLDANGNASYAFNMYYQTQDQNYMACNFEGLARLTTSNISTPTCN | |||
GH17 | 1 | 300 | 0 |
MLKDNGIQKVKLFDADESSMSALSGSGIEVMVAIPNNQLAEMNDYDRALQWVKKNVTRYNFRGGVNIKYVAVGNEPFLKSYNGSFLNITLPALQNIQNAL NDAGLGDSIKATVPLNADVYESPPNSPVPSAGIFRPDISDLMTQIVQFLAKNKAPFTVNIYPFLSLYGNDNFPFDYAFFDGVANPIIDNGVSYTNVFDAN FDTLVSALKKVGYGNMPVLVGEVGWPTDGDKNANVGNAFRFYNGLLPRLAMNKGTPLRPGFIEVYLFGLIDEDAKNIAPGNFERHWGIFGYDGKPKFPMD |
Full Sequence |
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Protein Sequence Length: 437 Download |
MLKDNGIQKV KLFDADESSM SALSGSGIEV MVAIPNNQLA EMNDYDRALQ WVKKNVTRYN 60 FRGGVNIKYV AVGNEPFLKS YNGSFLNITL PALQNIQNAL NDAGLGDSIK ATVPLNADVY 120 ESPPNSPVPS AGIFRPDISD LMTQIVQFLA KNKAPFTVNI YPFLSLYGND NFPFDYAFFD 180 GVANPIIDNG VSYTNVFDAN FDTLVSALKK VGYGNMPVLV GEVGWPTDGD KNANVGNAFR 240 FYNGLLPRLA MNKGTPLRPG FIEVYLFGLI DEDAKNIAPG NFERHWGIFG YDGKPKFPMD 300 LSGKGQKKVL VGAQNVHYLE PNWCMFNPDA QDLSKLADNI NYACTLADCT ALGYGSSCNN 360 LDANGNASYA FNMYYQTQDQ NYMACNFEGL ARLTTSNIST PTCNFIVQIN PSLSSSLRPQ 420 IVAFLFVTLL PFILFL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 7.0e-6 | 214 | 292 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-17 | 323 | 391 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-31 | 323 | 405 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-68 | 1 | 300 | 303 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ90287.1 | 0 | 1 | 435 | 48 | 480 | beta-1,3-glucanase, acidic [Coffea arabica] |
GenBank | ABN09816.1 | 0 | 1 | 412 | 46 | 457 | Glycoside hydrolase, family 17; X8 [Medicago truncatula] |
RefSeq | XP_002277003.1 | 0 | 1 | 409 | 45 | 453 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319699.1 | 0 | 1 | 436 | 43 | 478 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525445.1 | 0 | 1 | 425 | 43 | 469 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 1 | 302 | 22 | 316 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
PDB | 3f55_C | 0 | 1 | 302 | 22 | 316 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
PDB | 3f55_B | 0 | 1 | 302 | 22 | 316 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
PDB | 3f55_A | 0 | 1 | 302 | 22 | 316 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
PDB | 3em5_D | 0 | 1 | 302 | 22 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GR410464 | 302 | 61 | 360 | 0 |
CA993350 | 302 | 108 | 409 | 0 |
DV709068 | 296 | 114 | 409 | 0 |
DV708027 | 295 | 114 | 408 | 0 |
DV710304 | 292 | 114 | 405 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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