Basic Information | |
---|---|
Species | Glycine max |
Cazyme ID | Glyma04g07820.2 |
Family | CBM43 |
Protein Properties | Length: 490 Molecular Weight: 53425.7 Isoelectric Point: 6.1662 |
Chromosome | Chromosome/Scaffold: 04 Start: 6093989 End: 6098392 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 371 | 453 | 5.7e-26 |
WCVLKPSANLNDDQLAPSVAYACQNADCTSLGYGTSCGNLDVHGNISYAFNSYYQINDQMDSACKFPGLSMITDKDPSVGDCK | |||
GH17 | 31 | 349 | 0 |
IGVNWGTQSTHPLSPSKVVKMLKDNGIQKVKLFDADAGILDALKKSGIQVMVGIPNDMLYTLANSVEAAEKWVSKNISKHVSSGGVDIRYVAVGNEPFLS TYNGSFEATTLPALQNIQAALTRSGLSNRVKVTVPLNADVYQSSSEKPSDGGFRPDINNVMLQIVKFLNDNGAPFTVNIYPFISLYADPNFPVDYAFFNG YQPTINDNGRAYDNVFDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGDRNANLQYAQRFNQGFMSRYMSGKGTPMRPGPIDAYLFSLIDEDAKSIQPGN FERHWGMFYFDGQPKYQLN |
Full Sequence |
---|
Protein Sequence Length: 490 Download |
MELMGGGKFS RCFVVVVVVG VLFLVGSVSG IGVNWGTQST HPLSPSKVVK MLKDNGIQKV 60 KLFDADAGIL DALKKSGIQV MVGIPNDMLY TLANSVEAAE KWVSKNISKH VSSGGVDIRY 120 VAVGNEPFLS TYNGSFEATT LPALQNIQAA LTRSGLSNRV KVTVPLNADV YQSSSEKPSD 180 GGFRPDINNV MLQIVKFLND NGAPFTVNIY PFISLYADPN FPVDYAFFNG YQPTINDNGR 240 AYDNVFDANH DTLVWALQKN GFGNLPIIVG EIGWPTDGDR NANLQYAQRF NQGFMSRYMS 300 GKGTPMRPGP IDAYLFSLID EDAKSIQPGN FERHWGMFYF DGQPKYQLNL GSARGNGLVG 360 ASGVDHLAKK WCVLKPSANL NDDQLAPSVA YACQNADCTS LGYGTSCGNL DVHGNISYAF 420 NSYYQINDQM DSACKFPGLS MITDKDPSVG DCKFRIMIQT DSAEPHGKVG YLTTVLCFFV 480 LLLFCNLWF* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-5 | 59 | 341 | 289 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 4.0e-15 | 370 | 441 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-30 | 370 | 454 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-77 | 44 | 349 | 308 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_194843.1 | 0 | 9 | 485 | 3 | 479 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002324127.1 | 0 | 27 | 483 | 37 | 498 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330836.1 | 0 | 11 | 484 | 23 | 494 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528007.1 | 0 | 28 | 467 | 26 | 465 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002530371.1 | 0 | 12 | 483 | 4 | 482 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 31 | 350 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 31 | 350 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 31 | 350 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 31 | 350 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 31 | 350 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |