| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma04g22190.1 |
| Family | CBM43 |
| Protein Properties | Length: 504 Molecular Weight: 55845.1 Isoelectric Point: 5.9475 |
| Chromosome | Chromosome/Scaffold: 04 Start: 25467949 End: 25470905 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 387 | 468 | 3e-26 |
| WCILDPDVTNLDDLAGNIDYACTFSDCTSLGYGSTCNNLSVQGNASYAFNMYYQVNNQQNWDCDFSGLAVITHKDPSLNGCQ | |||
| GH17 | 44 | 364 | 0 |
| VGVNWGTMATHQLPPEKVVKMLKENGFRKLKLFDADEFIMAALMGTGIEVMVAIPNNMLDKISNSPKAADSWVNDNVTSYLFTGGVKIKYVAVGNEPFLK AYNGSFAKKTLPALKNIQTSLNKAGLGSKIKITVPFNADIYYSPDSNPVPSAGDFRPEVRDLTVEIIQFLYANNAPFTVNIYPFLSLYGNEDFPFDFAFF DGNNKPLRDGKTLYTNVFDANLDTLLWALDKAGYPDMEVMIGEIGWPTDGDKNANAKNAKRFNLGLLKHALSGKGTPKRKGTIDLFLFSLIDEDTKSVAP GNFERHWGIFEFDGKPKYELD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 504 Download |
| MFCSVTIILE PSQKPAKEMA PNCLHQVAFL LVFLIVVSSG YAWVGVNWGT MATHQLPPEK 60 VVKMLKENGF RKLKLFDADE FIMAALMGTG IEVMVAIPNN MLDKISNSPK AADSWVNDNV 120 TSYLFTGGVK IKYVAVGNEP FLKAYNGSFA KKTLPALKNI QTSLNKAGLG SKIKITVPFN 180 ADIYYSPDSN PVPSAGDFRP EVRDLTVEII QFLYANNAPF TVNIYPFLSL YGNEDFPFDF 240 AFFDGNNKPL RDGKTLYTNV FDANLDTLLW ALDKAGYPDM EVMIGEIGWP TDGDKNANAK 300 NAKRFNLGLL KHALSGKGTP KRKGTIDLFL FSLIDEDTKS VAPGNFERHW GIFEFDGKPK 360 YELDLTGQHQ QKGLVPVEGI KYMEKRWCIL DPDVTNLDDL AGNIDYACTF SDCTSLGYGS 420 TCNNLSVQGN ASYAFNMYYQ VNNQQNWDCD FSGLAVITHK DPSLNGCQFP VMISSSSSLL 480 LHGGFSDILK KALRVFIFVM FLL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0001 | 282 | 356 | 75 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 3.0e-18 | 386 | 456 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 6.0e-31 | 387 | 469 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-77 | 44 | 364 | 323 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28113.1 | 0 | 13 | 482 | 516 | 959 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_189076.1 | 0 | 25 | 503 | 16 | 497 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002281500.1 | 0 | 18 | 482 | 3 | 466 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324967.1 | 0 | 44 | 482 | 9 | 448 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515573.1 | 0 | 17 | 502 | 4 | 489 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 0 | 44 | 365 | 3 | 314 | A Chain A, Crystal Structure Of N-acetylglucosaminyltransferase I |
| PDB | 3ur8_A | 0 | 44 | 365 | 3 | 314 | A Chain A, Crystal Structure Of N-acetylglucosaminyltransferase I |
| PDB | 3ur7_B | 0 | 44 | 365 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 44 | 365 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 4gzj_A | 0 | 44 | 365 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
