| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma05g31860.1 |
| Family | CBM43 |
| Protein Properties | Length: 482 Molecular Weight: 52844.9 Isoelectric Point: 6.0148 |
| Chromosome | Chromosome/Scaffold: 05 Start: 36895337 End: 36897732 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 368 | 447 | 2.8e-25 |
| WCVLKNNANKSALGGSLSYACAGGDCTSLCPGCSCGNLDASGNASYAFNQYFQINDQSVEACDFEGLATIVSKDPSKGDC | |||
| GH17 | 27 | 346 | 0 |
| IGVNWGAIASHPMDPPIVVNLLKDNGIKKVKLFDADSWTVSAFSGTDIEVMVGIPNDQLKELSKDQDNAEDWVKQNVSKHVHDGGVNIRYVSVGNEPFLK SYNGSFVGITFPAMENVQKAIDKAGLGDKIKVTTALNADVYESNSNKPSDGNFRKDIYGVMKQIVKFLDEKKSPFLVNIYPFLSLYQNEDFPEDYAFFEG HGKSTDDKNAHYTNMFDANLDTLVWSLKKIGHPNVSICVGEIGWPTDGDKNANDKNANRFYQGFLKKMASKKGTPLHPGPVNTYLFSLFDENMKSVAPGD FERHWGIFRYDGKPKFPIDF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 482 Download |
| MWAFCMILVL AHCQLQGGEG AEAVSGIGVN WGAIASHPMD PPIVVNLLKD NGIKKVKLFD 60 ADSWTVSAFS GTDIEVMVGI PNDQLKELSK DQDNAEDWVK QNVSKHVHDG GVNIRYVSVG 120 NEPFLKSYNG SFVGITFPAM ENVQKAIDKA GLGDKIKVTT ALNADVYESN SNKPSDGNFR 180 KDIYGVMKQI VKFLDEKKSP FLVNIYPFLS LYQNEDFPED YAFFEGHGKS TDDKNAHYTN 240 MFDANLDTLV WSLKKIGHPN VSICVGEIGW PTDGDKNAND KNANRFYQGF LKKMASKKGT 300 PLHPGPVNTY LFSLFDENMK SVAPGDFERH WGIFRYDGKP KFPIDFSGKG EDKMPIGAKG 360 VRYQEHKWCV LKNNANKSAL GGSLSYACAG GDCTSLCPGC SCGNLDASGN ASYAFNQYFQ 420 INDQSVEACD FEGLATIVSK DPSKGDCYFP IAIISSGNIL RVMQNVVGIL IGFTLIFTTF 480 M* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0002 | 260 | 337 | 78 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-17 | 367 | 436 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-30 | 367 | 449 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 4.0e-86 | 27 | 346 | 322 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN62816.1 | 0 | 1 | 460 | 8 | 461 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_179534.1 | 0 | 9 | 456 | 3 | 451 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002275701.1 | 0 | 1 | 460 | 8 | 461 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310612.1 | 0 | 1 | 481 | 8 | 485 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530257.1 | 0 | 1 | 458 | 9 | 460 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 0 | 27 | 347 | 3 | 315 | A Chain A, Apo Form Of A Mutant Of Glycogenin In Which Asp159 Is Replaced By Asn |
| PDB | 3ur8_A | 0 | 27 | 347 | 3 | 315 | A Chain A, Apo Form Of A Mutant Of Glycogenin In Which Asp159 Is Replaced By Asn |
| PDB | 3ur7_B | 0 | 27 | 347 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 27 | 347 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 4gzj_A | 0 | 27 | 347 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
