Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma06g15240.2 |
Family | CBM43 |
Protein Properties | Length: 490 Molecular Weight: 54024.2 Isoelectric Point: 5.634 |
Chromosome | Chromosome/Scaffold: 06 Start: 11978602 End: 11981118 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 375 | 455 | 1.7e-24 |
WCVLSSDVKNLSLVPSALDYACAGADCTSLGFGCSCDKLDLAGNASFAFNQYFQTRDQSVEACDFNGMGTIVKQDPSKGSC | |||
GH17 | 32 | 353 | 0 |
LGINWGALASHTLNPNVVVNMLKDNGIKKVKLFDADSWTLSALSGTDIEVMVGIPNDQLSKFAGSSGDAEAWVRENLTKHIHNHHGSVNIRHVSVGNEPF MKGYKGAYVKTTFPAMQNIQKAIDKAGLGDTVKVTTALNADVYESASDKPSDGDFRSDIYDAIKQILSLLHERNSPFLVNIYPFLSLYQNDNFPEEFAFF DGQGRTIQDKDAQYSNVYDANLDTLVWSLRKAGYPDLRIVVGEIGWPTDGNKNANNYNAKRFYQGLLKKMVHKKGTPLRPGAMEMYLFSLTDENLKSIEP GNFERHWGIFGYDGRPKFPIDF |
Full Sequence |
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Protein Sequence Length: 490 Download |
MAPTEFFMWG LCLILVFAHY QGAQGEESIP GLGINWGALA SHTLNPNVVV NMLKDNGIKK 60 VKLFDADSWT LSALSGTDIE VMVGIPNDQL SKFAGSSGDA EAWVRENLTK HIHNHHGSVN 120 IRHVSVGNEP FMKGYKGAYV KTTFPAMQNI QKAIDKAGLG DTVKVTTALN ADVYESASDK 180 PSDGDFRSDI YDAIKQILSL LHERNSPFLV NIYPFLSLYQ NDNFPEEFAF FDGQGRTIQD 240 KDAQYSNVYD ANLDTLVWSL RKAGYPDLRI VVGEIGWPTD GNKNANNYNA KRFYQGLLKK 300 MVHKKGTPLR PGAMEMYLFS LTDENLKSIE PGNFERHWGI FGYDGRPKFP IDFSGQGQDK 360 WPVAAKGVVY QERQWCVLSS DVKNLSLVPS ALDYACAGAD CTSLGFGCSC DKLDLAGNAS 420 FAFNQYFQTR DQSVEACDFN GMGTIVKQDP SKGSCLFPIE IESSGDMVRA MRAIGSILIG 480 LALFFVTFT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0004 | 270 | 344 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-13 | 374 | 444 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-29 | 374 | 457 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-82 | 32 | 353 | 325 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN62816.1 | 0 | 1 | 466 | 1 | 459 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_201284.1 | 0 | 29 | 469 | 25 | 463 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002275701.1 | 0 | 1 | 466 | 1 | 459 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310612.1 | 0 | 1 | 488 | 1 | 484 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530257.1 | 0 | 6 | 466 | 7 | 460 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 32 | 354 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3ur8_A | 0 | 32 | 354 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3ur7_B | 0 | 32 | 354 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 32 | 354 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0 | 32 | 354 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |