Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma06g23474.1 |
Family | CBM43 |
Protein Properties | Length: 484 Molecular Weight: 53772.5 Isoelectric Point: 6.4067 |
Chromosome | Chromosome/Scaffold: 06 Start: 20742690 End: 20745659 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 367 | 448 | 1.3e-26 |
WCILNPDVTKLDDLAGSIDYACTFSDCTSLGYGSTCNNLSVQGNASYAFNMYYQVNNQQNWDCDFSGLAVITHKDPSQNGCQ | |||
GH17 | 26 | 344 | 0 |
VGVNWGTMATHQLQPEKVVKMLKENGFRKLKLFDADEFIMTALMGTDIEVMVAIPNNMLDKISNSPKAADSWVNDNVTSYFTGVKIKYVAVGNEPFLKAY NGSFAKKTLPALKNIQTSLNKAGLGSKIKITVPFNADIYYSPDSNPVPSTGDFRPEVRDLTVEIIQFLYANNAPFTVNIYPFLSLYGNQDFPFDFAFFDG NNKPLRDGKALYTNVFDANLDTLLWALDKAGYPDMKVMIGEIGWPTDGDKNANAKNAKRFNLGLLKHALSGKGTPKRNGTVDLFLFSLIDEDTKSVAPGN FERHWGIFEFDGKPKYELD |
Full Sequence |
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Protein Sequence Length: 484 Download |
MAPNFLHQVA FLLVLSTAVS SGYAWVGVNW GTMATHQLQP EKVVKMLKEN GFRKLKLFDA 60 DEFIMTALMG TDIEVMVAIP NNMLDKISNS PKAADSWVND NVTSYFTGVK IKYVAVGNEP 120 FLKAYNGSFA KKTLPALKNI QTSLNKAGLG SKIKITVPFN ADIYYSPDSN PVPSTGDFRP 180 EVRDLTVEII QFLYANNAPF TVNIYPFLSL YGNQDFPFDF AFFDGNNKPL RDGKALYTNV 240 FDANLDTLLW ALDKAGYPDM KVMIGEIGWP TDGDKNANAK NAKRFNLGLL KHALSGKGTP 300 KRNGTVDLFL FSLIDEDTKS VAPGNFERHW GIFEFDGKPK YELDLIGQHK EKGLVPVEDI 360 KYMEKRWCIL NPDVTKLDDL AGSIDYACTF SDCTSLGYGS TCNNLSVQGN ASYAFNMYYQ 420 VNNQQNWDCD FSGLAVITHK DPSQNGCQFP VMISSSSSLL LHGGLSEILK KALRVYIFVM 480 FLL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0004 | 262 | 336 | 75 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 4.0e-18 | 366 | 436 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-32 | 367 | 449 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 5.0e-78 | 26 | 344 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI28113.1 | 0 | 9 | 462 | 531 | 959 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189076.1 | 0 | 7 | 483 | 16 | 497 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002281500.1 | 0 | 9 | 462 | 13 | 466 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324967.1 | 0 | 26 | 462 | 9 | 448 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515573.1 | 0 | 9 | 482 | 13 | 489 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 26 | 345 | 3 | 314 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3ur8_A | 0 | 26 | 345 | 3 | 314 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3ur7_B | 0 | 26 | 345 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 26 | 345 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0 | 26 | 345 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |