| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma07g39950.1 |
| Family | CBM43 |
| Protein Properties | Length: 484 Molecular Weight: 52593.1 Isoelectric Point: 5.0487 |
| Chromosome | Chromosome/Scaffold: 07 Start: 44294724 End: 44297631 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 365 | 444 | 2.9e-25 |
| WCVASPSTDAQNVANHMRIACSVADCTTLDYGGSCNGIGEKGNISYAFNSYYQLQMQDSRSCNFDGLGVITFRDPSVGDC | |||
| GH17 | 26 | 344 | 0 |
| IGVNWGTVSFHKLKPSTVVGLLKDNKIPKVKVFEAEADVLKALMGSGIQVMLGIPNEMLPLLSTSPAAADSWLRQNVSAYLGKGGADIRYIAVGNEPFLT SYNGQYQNLVMPAILNLQQSLVKANLAGYIKLVVPCNADAYESSLPSQGAFRPELTQIMTQLVQFLNSNGTPFIVNIYPFLSLYDNNDFPQDYAFFEGTT HPVTDGNNVYTNAFDGNYDTLVAALSKLGYDQMPIVIGEIGWPSDGAIGANITAAKVFNQGLISHVLSNKGTPLRPDAPPMDIYLFSLLDEGAKSILPGG FERHWGIFSFDGQAKYPLN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 484 Download |
| MLEATRWLLG AGILMWMLAW LGESAIGVNW GTVSFHKLKP STVVGLLKDN KIPKVKVFEA 60 EADVLKALMG SGIQVMLGIP NEMLPLLSTS PAAADSWLRQ NVSAYLGKGG ADIRYIAVGN 120 EPFLTSYNGQ YQNLVMPAIL NLQQSLVKAN LAGYIKLVVP CNADAYESSL PSQGAFRPEL 180 TQIMTQLVQF LNSNGTPFIV NIYPFLSLYD NNDFPQDYAF FEGTTHPVTD GNNVYTNAFD 240 GNYDTLVAAL SKLGYDQMPI VIGEIGWPSD GAIGANITAA KVFNQGLISH VLSNKGTPLR 300 PDAPPMDIYL FSLLDEGAKS ILPGGFERHW GIFSFDGQAK YPLNLGLGNK ELKNAKNVQY 360 LPSRWCVASP STDAQNVANH MRIACSVADC TTLDYGGSCN GIGEKGNISY AFNSYYQLQM 420 QDSRSCNFDG LGVITFRDPS VGDCRFLVGV TDKGSDSSAS QIRCQWWILL AFLVIQTISS 480 FSL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0009 | 63 | 336 | 281 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 3.0e-16 | 364 | 433 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 7.0e-29 | 365 | 446 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 5.0e-77 | 26 | 342 | 319 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABN08871.1 | 0 | 23 | 466 | 4 | 451 | Glycoside hydrolase, family 17; X8 [Medicago truncatula] |
| EMBL | CAB10499.1 | 0 | 10 | 468 | 31 | 488 | glucanase like protein [Arabidopsis thaliana] |
| RefSeq | NP_193451.2 | 0 | 10 | 468 | 4 | 461 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002329964.1 | 0 | 21 | 467 | 24 | 468 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525026.1 | 0 | 23 | 474 | 23 | 480 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 26 | 345 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghr_A | 0 | 26 | 345 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1aq0_B | 0 | 26 | 345 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 26 | 345 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3f55_D | 1.4013e-45 | 26 | 345 | 2 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
