Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma09g01910.2 |
Family | CBM43 |
Protein Properties | Length: 488 Molecular Weight: 53033.6 Isoelectric Point: 5.859 |
Chromosome | Chromosome/Scaffold: 09 Start: 1241364 End: 1243969 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 366 | 445 | 8.5e-25 |
WCVANPSGDLNDVVNHIRLACSVADCTTLNYGGSCNEIGEKGNISYAFNSYYQLQMQDSRSCNFDGLGMVTFLDPSVGDC | |||
GH17 | 26 | 345 | 0 |
IGVNWGTISSHRLKPTTVVALLRQNKISKVKLFEADSDVMKALMGSAIQVMVGIPNEMLPLLSSSPAAADLWVRQNVSVYVGRGGADIRYVAVGNEPFLS SYNGQYQNLIMPAILNIQQSLVKANLAGYIKLVVPCNADAYQSSALPSQGAFRPELTQIMSQLVQFLNSNGSPFVVNIYPFLSLYNNGDFPQEYAFFEGT THAVQDGSNVYTNAFEGNYDTLVAALTKLGYGQMPIVIGEIGWPSDGAIGANITAAKVFNQGLINHIASNKGTPLRPNAPPTDVYLFSLLDEGAKSTLPG NFERHWGIFSFDGQAKYPLN |
Full Sequence |
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Protein Sequence Length: 488 Download |
MLEPRFGGGV LLLWLLLVPR MVESAIGVNW GTISSHRLKP TTVVALLRQN KISKVKLFEA 60 DSDVMKALMG SAIQVMVGIP NEMLPLLSSS PAAADLWVRQ NVSVYVGRGG ADIRYVAVGN 120 EPFLSSYNGQ YQNLIMPAIL NIQQSLVKAN LAGYIKLVVP CNADAYQSSA LPSQGAFRPE 180 LTQIMSQLVQ FLNSNGSPFV VNIYPFLSLY NNGDFPQEYA FFEGTTHAVQ DGSNVYTNAF 240 EGNYDTLVAA LTKLGYGQMP IVIGEIGWPS DGAIGANITA AKVFNQGLIN HIASNKGTPL 300 RPNAPPTDVY LFSLLDEGAK STLPGNFERH WGIFSFDGQA KYPLNLLLGN KELKNARNVE 360 YLPSRWCVAN PSGDLNDVVN HIRLACSVAD CTTLNYGGSC NEIGEKGNIS YAFNSYYQLQ 420 MQDSRSCNFD GLGMVTFLDP SVGDCHFLVG VTDKGSDSST SQTMAPSHQW WTLVLLLILH 480 GTFLLSM* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0002 | 173 | 337 | 178 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-17 | 365 | 434 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-30 | 366 | 447 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-77 | 26 | 343 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08871.1 | 0 | 23 | 487 | 4 | 468 | Glycoside hydrolase, family 17; X8 [Medicago truncatula] |
EMBL | CAB10499.1 | 0 | 7 | 470 | 33 | 486 | glucanase like protein [Arabidopsis thaliana] |
RefSeq | NP_193451.2 | 0 | 7 | 470 | 6 | 459 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002329964.1 | 0 | 23 | 487 | 26 | 484 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525026.1 | 0 | 11 | 479 | 11 | 478 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 346 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghr_A | 0 | 26 | 346 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 0 | 26 | 346 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 26 | 346 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3f55_D | 0 | 26 | 346 | 2 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |