Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma11g29410.1 |
Family | CBM43 |
Protein Properties | Length: 487 Molecular Weight: 53292.7 Isoelectric Point: 7.6207 |
Chromosome | Chromosome/Scaffold: 11 Start: 30080989 End: 30084428 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 372 | 451 | 3.3e-25 |
WCVVNNNKDLSNATASALEACANADCTALSPGGSCFNISWPSNISYAFNSYYQQHDQRAESCDFGGLGLITTVDPSMDHC | |||
GH17 | 29 | 351 | 0 |
VGVNWGTMASHPLPPHKVVKLLKSNSINKVKLFDANSDVLQALSGSNIAVTVGVPNTLLRSLNSSKKAADSWVHDNVTRYMPNGGTVTRIEYVAVGDEPF LKSYGEQFHPFLIGAAMNIQAALKKAKLDSKVKVVVPCSFDSFESGFNLSSGVNFRPDLNKTMIELLAFLDKHGSPFFVTISPFITHLQTKNISLDFSLF KETARPHNLSHKTYKNSFDLSYDTVATVLSTAGYPNMDIVVAKIGWPTDGAANASSYLAETFIKGLINHLHSNLGTPLKPHKPPLETYILSLLDEDQRSI TSGNFERHWGLFTFDGQAKYHVD |
Full Sequence |
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Protein Sequence Length: 487 Download |
MPTTTTTFSC FLFTFLITTS TMASMVGAVG VNWGTMASHP LPPHKVVKLL KSNSINKVKL 60 FDANSDVLQA LSGSNIAVTV GVPNTLLRSL NSSKKAADSW VHDNVTRYMP NGGTVTRIEY 120 VAVGDEPFLK SYGEQFHPFL IGAAMNIQAA LKKAKLDSKV KVVVPCSFDS FESGFNLSSG 180 VNFRPDLNKT MIELLAFLDK HGSPFFVTIS PFITHLQTKN ISLDFSLFKE TARPHNLSHK 240 TYKNSFDLSY DTVATVLSTA GYPNMDIVVA KIGWPTDGAA NASSYLAETF IKGLINHLHS 300 NLGTPLKPHK PPLETYILSL LDEDQRSITS GNFERHWGLF TFDGQAKYHV DLGQGSKSLV 360 NAQNVEYLSS KWCVVNNNKD LSNATASALE ACANADCTAL SPGGSCFNIS WPSNISYAFN 420 SYYQQHDQRA ESCDFGGLGL ITTVDPSMDH CRFPIEIRVS HAEFHRMCNF LRVILLVTTL 480 LASLTV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0005 | 264 | 343 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-15 | 371 | 439 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-31 | 371 | 453 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-69 | 29 | 351 | 324 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF95444.1 | 0 | 29 | 476 | 35 | 480 | Glycosyl hydrolases family 17 protein, expressed [Oryza sativa (japonica cultivar-group)] |
EMBL | CBI28434.1 | 0 | 28 | 484 | 22 | 481 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_200656.2 | 0 | 20 | 462 | 17 | 453 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002269108.1 | 0 | 15 | 482 | 12 | 482 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313970.1 | 0 | 26 | 481 | 19 | 476 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 7.00649e-43 | 29 | 352 | 3 | 314 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ur8_A | 7.00649e-43 | 29 | 352 | 3 | 314 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ur7_B | 7.00649e-43 | 29 | 352 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 7.00649e-43 | 29 | 352 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 1.00053e-42 | 29 | 352 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |