| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma14g16830.1 |
| Family | CBM43 |
| Protein Properties | Length: 484 Molecular Weight: 53057.6 Isoelectric Point: 6.765 |
| Chromosome | Chromosome/Scaffold: 14 Start: 18300468 End: 18304162 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 367 | 449 | 1.4e-23 |
| WCILKTSANLNSDQVAPSVSYACQNADCTSLGYQTSCGGLDARGNLSYAFNSYFQVNDQIDSACKFPGLSVVTDKDPSTGDCK | |||
| GH17 | 29 | 346 | 0 |
| IGVNWGTQLTHPLPASTIVKMLKDNGIQKVKLFDADPDILNALKKSGIQVMVGIPNDMLYTLANNMQAAEKWVSKNVSAHVSSGGVDIRYVAVGNEPFLS TYNGTFEAITLPALQNIQSALVKAGLGNQVKVTVPLNADVYQSTQVPSDGDFRQNIHDLMVQIVKFLSQNNAPFTVNIYPFISLYSDSNFPVDYAFFNGF QSPINDNGRIYDNVFDANHDTLVWALQKNGFGNMPIIVGEVGWPTDGDRNANLQYAQRFNQGFMSRYIAGKGTPMRPGPMDAYLFSLIDEDFKSIQPGNF ERHWGLFYYDGQPKYMLN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 484 Download |
| MELMVCGKLR GCLVLVFFAA LLVGLVNGIG VNWGTQLTHP LPASTIVKML KDNGIQKVKL 60 FDADPDILNA LKKSGIQVMV GIPNDMLYTL ANNMQAAEKW VSKNVSAHVS SGGVDIRYVA 120 VGNEPFLSTY NGTFEAITLP ALQNIQSALV KAGLGNQVKV TVPLNADVYQ STQVPSDGDF 180 RQNIHDLMVQ IVKFLSQNNA PFTVNIYPFI SLYSDSNFPV DYAFFNGFQS PINDNGRIYD 240 NVFDANHDTL VWALQKNGFG NMPIIVGEVG WPTDGDRNAN LQYAQRFNQG FMSRYIAGKG 300 TPMRPGPMDA YLFSLIDEDF KSIQPGNFER HWGLFYYDGQ PKYMLNIGSR ANGLVAATGV 360 AYLPKKWCIL KTSANLNSDQ VAPSVSYACQ NADCTSLGYQ TSCGGLDARG NLSYAFNSYF 420 QVNDQIDSAC KFPGLSVVTD KDPSTGDCKF KIMIQTDSAG LHGNGRIWSL RIVLFVLLFF 480 TLM* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 4.0e-6 | 260 | 338 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-13 | 366 | 435 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-26 | 366 | 450 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-79 | 29 | 346 | 321 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI38945.1 | 0 | 13 | 480 | 10 | 479 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_194843.1 | 0 | 13 | 459 | 12 | 457 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002324127.1 | 0 | 26 | 481 | 38 | 499 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330836.1 | 0 | 12 | 482 | 24 | 496 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528007.1 | 0 | 7 | 483 | 8 | 490 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 0 | 29 | 346 | 3 | 313 | C Chain C, Crystal Structure Of The Crm1-Rangtp Complex |
| PDB | 3ur8_A | 0 | 29 | 346 | 3 | 313 | C Chain C, Crystal Structure Of The Crm1-Rangtp Complex |
| PDB | 3ur7_B | 0 | 29 | 346 | 3 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 29 | 346 | 3 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 4gzj_A | 0 | 29 | 346 | 3 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
