Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma15g12850.2 |
Family | CBM43 |
Protein Properties | Length: 462 Molecular Weight: 50535.6 Isoelectric Point: 6.5016 |
Chromosome | Chromosome/Scaffold: 15 Start: 9510329 End: 9513116 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 374 | 454 | 1.1e-24 |
WCVANPSGDLNNVVNHMRLACSVADCTTLNYGGSCNEIGEKGNISYAFNSYYQLQMQDSRSCNFDGLGMVTFLDPSVGDCQ | |||
GH17 | 34 | 353 | 0 |
IGVNWGTISSHRLKPTTVVDLLRQNKISKVKLFEADSDVLRALMGSGIQVMVGIPNEMLPFLSSSPAASDLWVRQNVSAYVGRGGADIRYVAVGNEPFLS SYNGQYQNLIMPAILNMQQSLVKANLAGYIKLVVPCNADAYQSSALPSQGAFRPELTQIMNQLVQFLNSNGSPFVVNIYPFLSLYNNGDFPQEYAFFEGT THAVQDGSNVYTNAFDGNYDTLVAALTKLGYGQMPIVIGEIGWPSDGAIDANITAAKVFNQGLINHIASNKGTPLRPNAPPMDVYLFSLLDEGAKSTLPG NFERHWGIFSFDGQAKYPLN |
Full Sequence |
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Protein Sequence Length: 462 Download |
MQHKTNLIIR FSGGVLLLWL LCGTLVPTMV ESAIGVNWGT ISSHRLKPTT VVDLLRQNKI 60 SKVKLFEADS DVLRALMGSG IQVMVGIPNE MLPFLSSSPA ASDLWVRQNV SAYVGRGGAD 120 IRYVAVGNEP FLSSYNGQYQ NLIMPAILNM QQSLVKANLA GYIKLVVPCN ADAYQSSALP 180 SQGAFRPELT QIMNQLVQFL NSNGSPFVVN IYPFLSLYNN GDFPQEYAFF EGTTHAVQDG 240 SNVYTNAFDG NYDTLVAALT KLGYGQMPIV IGEIGWPSDG AIDANITAAK VFNQGLINHI 300 ASNKGTPLRP NAPPMDVYLF SLLDEGAKST LPGNFERHWG IFSFDGQAKY PLNLLLGNKE 360 LKNARNVEYL PSRWCVANPS GDLNNVVNHM RLACSVADCT TLNYGGSCNE IGEKGNISYA 420 FNSYYQLQMQ DSRSCNFDGL GMVTFLDPSV GDCQFSCRRY R* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-5 | 196 | 345 | 155 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-16 | 373 | 442 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-28 | 374 | 455 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-78 | 34 | 351 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08871.1 | 0 | 31 | 455 | 4 | 429 | Glycoside hydrolase, family 17; X8 [Medicago truncatula] |
EMBL | CAB10499.1 | 0 | 12 | 455 | 30 | 467 | glucanase like protein [Arabidopsis thaliana] |
RefSeq | NP_193451.2 | 0 | 12 | 455 | 3 | 440 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002329964.1 | 0 | 15 | 455 | 12 | 449 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525026.1 | 0 | 31 | 455 | 23 | 446 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 0 | 34 | 354 | 1 | 306 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 1aq0_B | 0 | 34 | 354 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 34 | 354 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 2cyg_A | 0 | 34 | 354 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 34 | 354 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |