Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma16g04680.1 |
Family | CBM43 |
Protein Properties | Length: 479 Molecular Weight: 52552.8 Isoelectric Point: 5.0536 |
Chromosome | Chromosome/Scaffold: 16 Start: 3936254 End: 3940328 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 365 | 446 | 1.9e-24 |
WCMFNPDAKDLSKLPDNINYACTFGDCTALGYGSSCNNLDANGNASYAFNMYFQVQNQNPMACNFQGLAKLTTDNISTPTCN | |||
GH17 | 23 | 342 | 0 |
IGVNWGTQATHKLPPDTVVQMLKDNGIKKVKLFDSDDSTMSALAGTGIEVMVAIPNNQLAEMNDYGRAKQWVKKNVTRYNFNGGVNVKYVAVGNEPFLKS YNNSFLNITLPALQNIQNALNEAGLGDKIKATVPLNADVYQSPESNPVPSAGIFRPDISGLMTQIVQFLSKNGAPFTVNIYPFLSLYGNDDFPFNYAFFD GVDNPVNDNGTPYTNVFDANFDTLVAALKSVGFGDLPILVGEVGWPTEGDKNANAGNALRFYNGLLPRLAANRGTPRRPGYIEVYLFGLIDEDAKSIAPG NFERHWGIFRYDGQPKFPMD |
Full Sequence |
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Protein Sequence Length: 479 Download |
MEKNWVLRWI FVVGLMCLSV EGIGVNWGTQ ATHKLPPDTV VQMLKDNGIK KVKLFDSDDS 60 TMSALAGTGI EVMVAIPNNQ LAEMNDYGRA KQWVKKNVTR YNFNGGVNVK YVAVGNEPFL 120 KSYNNSFLNI TLPALQNIQN ALNEAGLGDK IKATVPLNAD VYQSPESNPV PSAGIFRPDI 180 SGLMTQIVQF LSKNGAPFTV NIYPFLSLYG NDDFPFNYAF FDGVDNPVND NGTPYTNVFD 240 ANFDTLVAAL KSVGFGDLPI LVGEVGWPTE GDKNANAGNA LRFYNGLLPR LAANRGTPRR 300 PGYIEVYLFG LIDEDAKSIA PGNFERHWGI FRYDGQPKFP MDLSGQNQNK FLIGAQNVKY 360 LAPRWCMFNP DAKDLSKLPD NINYACTFGD CTALGYGSSC NNLDANGNAS YAFNMYFQVQ 420 NQNPMACNFQ GLAKLTTDNI STPTCNFIVQ IVNSSASSLM MPSLVAILFV SLFLILFS* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00925 | GTP_cyclohydro2 | 0.003 | 42 | 77 | 36 | + GTP cyclohydrolase II. GTP cyclohydrolase II catalyzes the first committed step in the biosynthesis of riboflavin. | ||
COG5309 | COG5309 | 4.0e-5 | 250 | 334 | 89 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 8.0e-18 | 364 | 433 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-30 | 365 | 447 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-75 | 23 | 342 | 323 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ90287.1 | 0 | 18 | 476 | 23 | 480 | beta-1,3-glucanase, acidic [Coffea arabica] |
GenBank | ABN09816.1 | 0 | 1 | 456 | 1 | 459 | Glycoside hydrolase, family 17; X8 [Medicago truncatula] |
RefSeq | NP_179534.1 | 0 | 11 | 458 | 6 | 455 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002277003.1 | 0 | 1 | 451 | 2 | 453 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002525445.1 | 0 | 1 | 468 | 1 | 469 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 23 | 344 | 2 | 316 | C Chain C, Crystal Structure Of Ternary Protein-Dna Complex3 |
PDB | 3f55_C | 0 | 23 | 344 | 2 | 316 | C Chain C, Crystal Structure Of Ternary Protein-Dna Complex3 |
PDB | 3f55_B | 0 | 23 | 344 | 2 | 316 | C Chain C, Crystal Structure Of Ternary Protein-Dna Complex3 |
PDB | 3f55_A | 0 | 23 | 344 | 2 | 316 | C Chain C, Crystal Structure Of Ternary Protein-Dna Complex3 |
PDB | 3em5_D | 0 | 23 | 344 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |