| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma16g26860.1 |
| Family | CBM43 |
| Protein Properties | Length: 484 Molecular Weight: 53173.5 Isoelectric Point: 4.5522 |
| Chromosome | Chromosome/Scaffold: 16 Start: 30956315 End: 30959789 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 370 | 451 | 4.1e-24 |
| WCMFNPDAQDLSKLADNINYACTFADCTAIGYGSSGNNLDANGNASYAFNMYYQTQDQNYMACNFEGLARLTTSNISTPTCN | |||
| GH17 | 28 | 347 | 0 |
| LGVNWGTQATHQLKADTVVEMLKDNGIQKVKLFDADESSMSALSGSGIEVMVAIPNNQLAEMNDYDRALQWVKKNVTRYNFRGGINIKYVAVGNEPFLKS YNGSFLNITLPALQNIQNALNDAGLGDSIKATVPLNADVYESPPNNPVPSAGIFRPDISDLMTQIVQFLAKNNAPFTVNIYPFLSLYGNDNFPFDYAFFD GVANPINDNGVSYTNVFDANFDTLVSALEKVGYGNMPILVGEVGWPTDGDKNANVGNAFRFYNGLLPRLAINKGTPLRPGFIEVYLFGLIDEDAKTIAPG NFERHWGIFGYDGKPKFPMD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 484 Download |
| MMMGKGWFLR LVMVIGVMGW CWWCVEGLGV NWGTQATHQL KADTVVEMLK DNGIQKVKLF 60 DADESSMSAL SGSGIEVMVA IPNNQLAEMN DYDRALQWVK KNVTRYNFRG GINIKYVAVG 120 NEPFLKSYNG SFLNITLPAL QNIQNALNDA GLGDSIKATV PLNADVYESP PNNPVPSAGI 180 FRPDISDLMT QIVQFLAKNN APFTVNIYPF LSLYGNDNFP FDYAFFDGVA NPINDNGVSY 240 TNVFDANFDT LVSALEKVGY GNMPILVGEV GWPTDGDKNA NVGNAFRFYN GLLPRLAINK 300 GTPLRPGFIE VYLFGLIDED AKTIAPGNFE RHWGIFGYDG KPKFPMDLSG KGQNKLLVGA 360 QNVHYLEPNW CMFNPDAQDL SKLADNINYA CTFADCTAIG YGSSGNNLDA NGNASYAFNM 420 YYQTQDQNYM ACNFEGLARL TTSNISTPTC NFIVQINPSL SSSLRPPIVA SLFVTLLPLI 480 LFL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 3.0e-5 | 261 | 339 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 6.0e-18 | 370 | 438 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 8.0e-30 | 370 | 452 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 6.0e-73 | 28 | 347 | 323 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAQ90287.1 | 0 | 25 | 482 | 25 | 480 | beta-1,3-glucanase, acidic [Coffea arabica] |
| GenBank | ABN09816.1 | 0 | 3 | 459 | 1 | 457 | Glycoside hydrolase, family 17; X8 [Medicago truncatula] |
| RefSeq | XP_002277003.1 | 0 | 2 | 456 | 1 | 453 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319699.1 | 0 | 18 | 483 | 1 | 478 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525445.1 | 0 | 3 | 470 | 1 | 467 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 28 | 349 | 2 | 316 | A Chain A, Pyrobaculum Calidifontis Esterase Monoclinic Form |
| PDB | 3f55_C | 0 | 28 | 349 | 2 | 316 | A Chain A, Pyrobaculum Calidifontis Esterase Monoclinic Form |
| PDB | 3f55_B | 0 | 28 | 349 | 2 | 316 | A Chain A, Pyrobaculum Calidifontis Esterase Monoclinic Form |
| PDB | 3f55_A | 0 | 28 | 349 | 2 | 316 | A Chain A, Pyrobaculum Calidifontis Esterase Monoclinic Form |
| PDB | 3em5_D | 0 | 28 | 349 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
