Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma17g04900.1 |
Family | CBM43 |
Protein Properties | Length: 496 Molecular Weight: 53685.4 Isoelectric Point: 8.0788 |
Chromosome | Chromosome/Scaffold: 17 Start: 3284577 End: 3286786 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 366 | 450 | 5.5e-23 |
WCVMSTQANVDPNALAESMSKACTYADCTSLSPGSSCSGLDTRGNASYAFNMYFQTMNQQKDACNFNGLSVITNINPSPPQSSCK | |||
GH17 | 30 | 346 | 0 |
CNWGTRLTHPLTPQITVKLMKDNGFKQVKLFEADPAALKALGNSGIQVMVGIPNDLLATLASNVDAAIAWVNQNVSSYISKNGVDIRYVAVGNEAFLKTY NGRFVNSTFPAIQNIQAALIKAGLGRQVKVTTPLNADVYQSDSGLPSGGNFRPDIQDQMISIIKFLSQNGGPLTFNIYPFLSLDADPHFPKEFAFFDGSA APVVDGSITYTNVFDANYDTLITALEKNGFSQMPVIIGEVGWPTDGTANANIKNAQRFNQGLIDRIVKRQGSPKRPSPPDIYLFGFIDEDAKSIEPGPFE RHWGVFNFDGSIKYPLN |
Full Sequence |
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Protein Sequence Length: 496 Download |
MGLQHFTACV LLALCILSQG LAKGANGFAC NWGTRLTHPL TPQITVKLMK DNGFKQVKLF 60 EADPAALKAL GNSGIQVMVG IPNDLLATLA SNVDAAIAWV NQNVSSYISK NGVDIRYVAV 120 GNEAFLKTYN GRFVNSTFPA IQNIQAALIK AGLGRQVKVT TPLNADVYQS DSGLPSGGNF 180 RPDIQDQMIS IIKFLSQNGG PLTFNIYPFL SLDADPHFPK EFAFFDGSAA PVVDGSITYT 240 NVFDANYDTL ITALEKNGFS QMPVIIGEVG WPTDGTANAN IKNAQRFNQG LIDRIVKRQG 300 SPKRPSPPDI YLFGFIDEDA KSIEPGPFER HWGVFNFDGS IKYPLNLGGG KQLVGAKGVR 360 YLPKQWCVMS TQANVDPNAL AESMSKACTY ADCTSLSPGS SCSGLDTRGN ASYAFNMYFQ 420 TMNQQKDACN FNGLSVITNI NPSPPQSSCK FEIMIDLGKH EKKSTPSSVA PERKLHSMVM 480 LVSSFIFTVM FLLCV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 9.0e-8 | 67 | 338 | 282 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-14 | 365 | 434 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-27 | 365 | 451 | 89 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-75 | 42 | 346 | 307 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI27737.1 | 0 | 27 | 482 | 24 | 477 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_197587.1 | 0 | 5 | 488 | 4 | 500 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002277217.1 | 0 | 29 | 482 | 18 | 469 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309443.1 | 0 | 27 | 453 | 1 | 425 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516181.1 | 0 | 1 | 486 | 14 | 495 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 0 | 46 | 347 | 19 | 306 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1aq0_B | 0 | 46 | 347 | 19 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 46 | 347 | 19 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 2cyg_A | 0 | 42 | 335 | 15 | 300 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 2.8026e-45 | 45 | 347 | 19 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |