| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma17g29760.1 |
| Family | CBM43 |
| Protein Properties | Length: 481 Molecular Weight: 52737.3 Isoelectric Point: 6.5015 |
| Chromosome | Chromosome/Scaffold: 17 Start: 32569721 End: 32575312 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 364 | 446 | 1.3e-23 |
| WCILKTSANLNSDQVAPSVSYACQNADCTSLGYQTSCGGLDIRGNISYAFNSYFQVNDQIDSACKFPGLSVVTDKDPSTGDCK | |||
| GH17 | 29 | 343 | 0 |
| IGINWGTQLTHPLPASTIVKMLKDNGIQKVKLFDADPDILNALKKSGIQVMVGIPNDMLYTLANSMQAAEKWVSKNVSAHVSVDIRYVAVGNEPFLSTYN GTFEATTLPALQNIQLALVKAGLGNQVKVTCPLNADVYQSAQVPSDGDFRQDIHDLMVQIVKFLSQNNAPFTVNIYPFISLYSDPNFPVDYAFFNGFQSP ISDNGRIYDNVFDANHDTLVWALQKNGFGNMPIIVGEVGWPTDGDRNANLQYAQRFNQGFMSRYIAGKGTPMRPGPMDAYLFSLIDEDFKSIQPGNFERH WGLFYYDGQPKYQLN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 481 Download |
| MELMGCGKLR GCLVLVLFGA LLVGLVSGIG INWGTQLTHP LPASTIVKML KDNGIQKVKL 60 FDADPDILNA LKKSGIQVMV GIPNDMLYTL ANSMQAAEKW VSKNVSAHVS VDIRYVAVGN 120 EPFLSTYNGT FEATTLPALQ NIQLALVKAG LGNQVKVTCP LNADVYQSAQ VPSDGDFRQD 180 IHDLMVQIVK FLSQNNAPFT VNIYPFISLY SDPNFPVDYA FFNGFQSPIS DNGRIYDNVF 240 DANHDTLVWA LQKNGFGNMP IIVGEVGWPT DGDRNANLQY AQRFNQGFMS RYIAGKGTPM 300 RPGPMDAYLF SLIDEDFKSI QPGNFERHWG LFYYDGQPKY QLNIGSRANG LVAATGVAYL 360 PKKWCILKTS ANLNSDQVAP SVSYACQNAD CTSLGYQTSC GGLDIRGNIS YAFNSYFQVN 420 DQIDSACKFP GLSVVTDKDP STGDCKFKIM IQTDSAGLHG NGRIWSLRIV LFVLLFFTLM 480 * 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 4.0e-6 | 257 | 335 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-12 | 363 | 432 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-26 | 363 | 447 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 8.0e-80 | 29 | 343 | 318 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001151032.1 | 0 | 32 | 456 | 36 | 465 | glucan endo-1,3-beta-glucosidase 6 [Zea mays] |
| RefSeq | NP_194843.1 | 0 | 13 | 456 | 12 | 457 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002324127.1 | 0 | 26 | 478 | 38 | 499 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330836.1 | 0 | 21 | 479 | 30 | 496 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528007.1 | 0 | 7 | 480 | 8 | 490 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 0 | 29 | 343 | 1 | 305 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 1aq0_B | 0 | 29 | 343 | 1 | 305 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 29 | 343 | 1 | 305 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3ur8_B | 0 | 29 | 343 | 3 | 313 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3ur8_A | 0 | 29 | 343 | 3 | 313 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
