Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000195046 |
Family | CBM43 |
Protein Properties | Length: 494 Molecular Weight: 53461 Isoelectric Point: 4.8338 |
Chromosome | Chromosome/Scaffold: 012648342 Start: 3987 End: 6901 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 369 | 451 | 4.1e-24 |
WCVMSPSASLDDPEVALSVSYACSNADCTSLGYGTSCGDLDARGNISYAFNSYYQMNDQLDTACKFPNLSTTTTSDPSTGNCK | |||
GH17 | 29 | 347 | 0 |
IGVNWGTQLTHPLPPATIVKMLKDNGIQKVKLFDADSDILNALSKSGIQVMVGIPNEMLYSLANSKQAAEKWVSKNVSSHVSNGVDIRYAAVGNEPLLST YNGTYIPTIFPALQNIQSALIKAGVSNQVKVTIPLNADIYDSSGSDLPSNGDFRPDTKDLVVEIVKFLSDNGAAFTVNIYPFISLYNDPSFPADYAFFNG YSSPINDNGRIYNNVFDANHDTLVWALQKNGFGNLSIIVGEIGWPTDGDRNANLQYAQRFNQGFMSHIKNNAGTPMRSGPVDAYLFSLIDEDAKSIQPGN FERHWGLFYYDGTPKYQLS |
Full Sequence |
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Protein Sequence Length: 494 Download |
MGLLKGMGFR GLSIAFLFLN LGVGLVVGIG VNWGTQLTHP LPPATIVKML KDNGIQKVKL 60 FDADSDILNA LSKSGIQVMV GIPNEMLYSL ANSKQAAEKW VSKNVSSHVS NGVDIRYAAV 120 GNEPLLSTYN GTYIPTIFPA LQNIQSALIK AGVSNQVKVT IPLNADIYDS SGSDLPSNGD 180 FRPDTKDLVV EIVKFLSDNG AAFTVNIYPF ISLYNDPSFP ADYAFFNGYS SPINDNGRIY 240 NNVFDANHDT LVWALQKNGF GNLSIIVGEI GWPTDGDRNA NLQYAQRFNQ GFMSHIKNNA 300 GTPMRSGPVD AYLFSLIDED AKSIQPGNFE RHWGLFYYDG TPKYQLSLGT TGXNGLIGAS 360 GVQYLEKKWC VMSPSASLDD PEVALSVSYA CSNADCTSLG YGTSCGDLDA RGNISYAFNS 420 YYQMNDQLDT ACKFPNLSTT TTSDPSTGNC KFSIMIRSSY SSSVNGRAGS LEKPSYLGLV 480 DCQAQLGLNE LIFV |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-6 | 261 | 339 | 80 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-13 | 368 | 439 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-28 | 368 | 452 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-72 | 42 | 347 | 308 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_194843.1 | 0 | 3 | 466 | 2 | 462 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002324127.1 | 0 | 26 | 469 | 38 | 484 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330836.1 | 0 | 9 | 457 | 22 | 467 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528007.1 | 0 | 26 | 459 | 26 | 459 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002530371.1 | 0 | 7 | 478 | 1 | 471 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 29 | 348 | 3 | 314 | A Chain A, Complex Of Amycolatopsis Orientalis Exo-Chitosanase Csxa D469a With Pnp-Beta-D-Glucosamine |
PDB | 3ur8_A | 0 | 29 | 348 | 3 | 314 | A Chain A, Complex Of Amycolatopsis Orientalis Exo-Chitosanase Csxa D469a With Pnp-Beta-D-Glucosamine |
PDB | 3ur7_B | 0 | 29 | 348 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 29 | 348 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0 | 29 | 348 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |