Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000228162 |
Family | CBM43 |
Protein Properties | Length: 499 Molecular Weight: 54913.6 Isoelectric Point: 6.8523 |
Chromosome | Chromosome/Scaffold: 02571514 Start: 5960 End: 8598 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 380 | 461 | 7.3e-25 |
WCVMKPSASLDDPQVALSVSYACGLADCTSLGYGTSCGNLDDRANISYAVNSYYQRNNQLDEACKFPNLSMITKTNPSVGSC | |||
GH17 | 40 | 358 | 0 |
IGANWGTQASHPLPPDTVVRLLKDNGFQRVKLFDADYDTLNSLAKSGIEVMVGIPNDMLASLATSVKAAEKWVSKNVSAHISSNNVKIRYVAVGNEPFLE TYNGSFLRTTFPALQNVQSALIKAGLSNQVKVTVPQNADVYASSNGFPSGGDFRTDIHDYMIQIVKFLSDNGCPFTVNIYPFISLYIDSNFPVDYAFFDG NASPITDGSATYYNMFDANYDTLVWTLQKNGFGNLPIIVGEIGWPTDGDRNANLVYAQRFNQGFMSHILGGRGTPMRPGPIDAYLFSLIDEDAKSIDPGN FERHWGIFTFDGLAKYQLN |
Full Sequence |
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Protein Sequence Length: 499 Download |
MGMMRMIRVA CLVTMIVVLM WSSSTNTNSR LRMVRMVSGI GANWGTQASH PLPPDTVVRL 60 LKDNGFQRVK LFDADYDTLN SLAKSGIEVM VGIPNDMLAS LATSVKAAEK WVSKNVSAHI 120 SSNNVKIRYV AVGNEPFLET YNGSFLRTTF PALQNVQSAL IKAGLSNQVK VTVPQNADVY 180 ASSNGFPSGG DFRTDIHDYM IQIVKFLSDN GCPFTVNIYP FISLYIDSNF PVDYAFFDGN 240 ASPITDGSAT YYNMFDANYD TLVWTLQKNG FGNLPIIVGE IGWPTDGDRN ANLVYAQRFN 300 QGFMSHILGG RGTPMRPGPI DAYLFSLIDE DAKSIDPGNF ERHWGIFTFD GLAKYQLNLG 360 STNSGALVPA KGVHYLERKW CVMKPSASLD DPQVALSVSY ACGLADCTSL GYGTSCGNLD 420 DRANISYAVN SYYQRNNQLD EACKFPNLSM ITKTNPSVGS CRFEIMIEPY YGAAERRSGH 480 LQKPLSLVAL FAFLMLTLV |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-5 | 69 | 350 | 288 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-15 | 379 | 445 | 74 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-30 | 379 | 463 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-74 | 40 | 358 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI38945.1 | 0 | 33 | 499 | 17 | 483 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002273826.1 | 0 | 33 | 499 | 99 | 565 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309034.1 | 0 | 40 | 479 | 4 | 444 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331390.1 | 0 | 31 | 473 | 2 | 448 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530371.1 | 0 | 12 | 499 | 3 | 482 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 0 | 40 | 359 | 1 | 306 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1aq0_B | 0 | 40 | 359 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 40 | 359 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 2cyg_A | 0 | 40 | 359 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 40 | 359 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |