| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr3g031770.1 |
| Family | CBM43 |
| Protein Properties | Length: 491 Molecular Weight: 54261.4 Isoelectric Point: 6.8295 |
| Chromosome | Chromosome/Scaffold: 3 Start: 9762615 End: 9767299 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 364 | 443 | 9.7e-25 |
| WCVVNNNEDLSNATAKALEACANADCTALSSGGSCFNITWPSNISYAFNSYYQEHDQKAESCDFGGLGLITTVDPSDDRC | |||
| GH17 | 27 | 343 | 0 |
| IGVNWGTMASHPLPPIKVVKLLKSNNINKVKLFDAKPDVLQALSGSNIGVTVGIPNAFLKSLNSSRKVADTWVHDNVTRYVSNGAKIEYVAVGDEPFLKS YGEQFHPFTVGAAMNIQAALKKAKLDNKMKVVVPCSFDSFESGSNSSTEVHFRSDINKTMIELLTFLDKHESPFFVTISPFLTFLQTKNISLDFSLFKET AHPHKLGHKTYKNSFDMSYDTVITVLSKVGFPNMEIVVSKIGWPTDGAANATSYLAETFMKGLMNHLHSNLGTPHRPPHETYIYSLLDEDQRSITAGDFE RHWGLFTFDGQSKYHVD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 491 Download |
| MSTVSSFITF TFFFFTIFNI ASISEAIGVN WGTMASHPLP PIKVVKLLKS NNINKVKLFD 60 AKPDVLQALS GSNIGVTVGI PNAFLKSLNS SRKVADTWVH DNVTRYVSNG AKIEYVAVGD 120 EPFLKSYGEQ FHPFTVGAAM NIQAALKKAK LDNKMKVVVP CSFDSFESGS NSSTEVHFRS 180 DINKTMIELL TFLDKHESPF FVTISPFLTF LQTKNISLDF SLFKETAHPH KLGHKTYKNS 240 FDMSYDTVIT VLSKVGFPNM EIVVSKIGWP TDGAANATSY LAETFMKGLM NHLHSNLGTP 300 HRPPHETYIY SLLDEDQRSI TAGDFERHWG LFTFDGQSKY HVDLGQGSKS LVNAQNVEYL 360 SSKWCVVNNN EDLSNATAKA LEACANADCT ALSSGGSCFN ITWPSNISYA FNSYYQEHDQ 420 KAESCDFGGL GLITTVDPSD DRCRFPIEIH TSNVELYRIS SSSNTIKTPP YLTLKKPTTR 480 AVSDNLEAPL * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 4.0e-15 | 363 | 431 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-30 | 363 | 445 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 6.0e-63 | 27 | 343 | 320 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF78459.1 | 0 | 27 | 452 | 32 | 460 | unknown [Zea mays] |
| EMBL | CBI28434.1 | 0 | 26 | 453 | 22 | 457 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_200656.2 | 0 | 25 | 452 | 24 | 451 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002269108.1 | 0 | 26 | 453 | 25 | 460 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313970.1 | 0 | 25 | 455 | 20 | 456 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 1.96182e-44 | 27 | 344 | 2 | 315 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
| PDB | 3f55_C | 1.96182e-44 | 27 | 344 | 2 | 315 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
| PDB | 3f55_B | 1.96182e-44 | 27 | 344 | 2 | 315 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
| PDB | 3f55_A | 1.96182e-44 | 27 | 344 | 2 | 315 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
| PDB | 3em5_D | 1.96182e-44 | 27 | 344 | 2 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
