Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr3g095050.1 |
Family | CBM43 |
Protein Properties | Length: 488 Molecular Weight: 53510.9 Isoelectric Point: 5.649 |
Chromosome | Chromosome/Scaffold: 3 Start: 32603583 End: 32605542 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 373 | 453 | 4.3e-24 |
WCVLNADVKNMSLIPPALDYACAGADCTSLGYGCSCGNLGLAGNASFAFNQFFQTRDQSVEACDFNGLGSIVTQDPSKGTC | |||
GH17 | 34 | 351 | 0 |
LGINWGALASNPMDPNIVANMLKDNGIKKVKLFDADPWIVSAFSGDFEVMVGIPNDQLSKFAGSLGDAEDWVKENLTKHLHNGGVNIRYVAVGNEPFLTS YGDKYVKKTFPAMQNIQKAIDKAGHGEVKVTTALNADVYESQTNKPSDGDFRDNIRDVMKQIIQFLHEKKSPFLVNIYPFLSLYQSEGFPEDFAFFGTHS MTISDKNAQYSNVFDANLDTLAWALKKSGYSDIKIVVGEIGWPTDGNKNANVNNAKRFYQGFLKNMASKKGTPMLPGHMDAYLFSLFDENLKSIDPGNFE RHWGIYRYDGKPKFPIDF |
Full Sequence |
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Protein Sequence Length: 488 Download |
MAGAEFSIGA LCLIVLLAYG TLHCVQGADS IPGLGINWGA LASNPMDPNI VANMLKDNGI 60 KKVKLFDADP WIVSAFSGDF EVMVGIPNDQ LSKFAGSLGD AEDWVKENLT KHLHNGGVNI 120 RYVAVGNEPF LTSYGDKYVK KTFPAMQNIQ KAIDKAGHGE VKVTTALNAD VYESQTNKPS 180 DGDFRDNIRD VMKQIIQFLH EKKSPFLVNI YPFLSLYQSE GFPEDFAFFG THSMTISDKN 240 AQYSNVFDAN LDTLAWALKK SGYSDIKIVV GEIGWPTDGN KNANVNNAKR FYQGFLKNMA 300 SKKGTPMLPG HMDAYLFSLF DENLKSIDPG NFERHWGIYR YDGKPKFPID FSGKGEEKLP 360 QSAKGVRYQE HKWCVLNADV KNMSLIPPAL DYACAGADCT SLGYGCSCGN LGLAGNASFA 420 FNQFFQTRDQ SVEACDFNGL GSIVTQDPSK GTCLFPIELE SNNGDMLTTM RIMASMLIGL 480 SIFFITL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-7 | 264 | 342 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 9.0e-15 | 372 | 442 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-29 | 372 | 455 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-74 | 34 | 351 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN62816.1 | 0 | 1 | 461 | 1 | 456 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_201284.1 | 0 | 9 | 465 | 3 | 461 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002275701.1 | 0 | 1 | 461 | 1 | 456 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310612.1 | 0 | 1 | 480 | 1 | 481 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530257.1 | 0 | 31 | 462 | 26 | 458 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 0 | 34 | 351 | 1 | 306 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1aq0_B | 0 | 34 | 351 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 34 | 351 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3ur8_B | 0 | 34 | 352 | 3 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3ur8_A | 0 | 34 | 352 | 3 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |