| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr8g092070.1 |
| Family | CBM43 |
| Protein Properties | Length: 582 Molecular Weight: 64621.3 Isoelectric Point: 7.4722 |
| Chromosome | Chromosome/Scaffold: 8 Start: 26020533 End: 26023979 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 375 | 455 | 3.2e-21 |
| WCVLSKEVKNLSSVYGPLGYACAVGDCTSLCIGCSCGNLDVRGNTSYAYNQYFQMNEQSVEACSFDGTATIVTQDPSNGTC | |||
| GH17 | 34 | 353 | 0 |
| VGVNWGLLATNPIDPNIVVNMIKDNGIKMVKIFDTDPWILGAFSGTDIEVMVGIPNDQLKKLSKSMDEAEDWVKHNVSKHMHDGGVNIRYVSVGNEAFLK SYNGSYVGTTFPAMENVQKAINKAGFGDKIKVTTALNADVYDTNSEKPSGGNFRADIFDVMKQIVKFLDENNSPFLVNIYPFLSLYQNDDFPEDYAFFDS SSRTISDNDIHYSNVFDANFDTLVWSLKKAGHPKVSIMIGEVGWPTDGNRHANPNTAKRFYQGFLKKMANKKGSPLRPGPMKVYLFSLVDENLKSVAPGD FERHWGIFRYDGKPKFPIDF | |||
| Full Sequence |
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| Protein Sequence Length: 582 Download |
| MFRTEFLLCT FCMMIVLAHC QQQGGQGAQT VPGVGVNWGL LATNPIDPNI VVNMIKDNGI 60 KMVKIFDTDP WILGAFSGTD IEVMVGIPND QLKKLSKSMD EAEDWVKHNV SKHMHDGGVN 120 IRYVSVGNEA FLKSYNGSYV GTTFPAMENV QKAINKAGFG DKIKVTTALN ADVYDTNSEK 180 PSGGNFRADI FDVMKQIVKF LDENNSPFLV NIYPFLSLYQ NDDFPEDYAF FDSSSRTISD 240 NDIHYSNVFD ANFDTLVWSL KKAGHPKVSI MIGEVGWPTD GNRHANPNTA KRFYQGFLKK 300 MANKKGSPLR PGPMKVYLFS LVDENLKSVA PGDFERHWGI FRYDGKPKFP IDFSGKGQDK 360 LPIGAKGVRY LDHKWCVLSK EVKNLSSVYG PLGYACAVGD CTSLCIGCSC GNLDVRGNTS 420 YAYNQYFQMN EQSVEACSFD GTATIVTQDP SNGTCLFPIE IYSGGTMLQG GIHTVRILLI 480 GLRNRTLFPR LLISNQTYGV MEVKPNRDKG FSEENNTKNI NLSPSAMKGF SDGGNERRAD 540 GNEKQQPHSD GGGEEVIKWP SYKRGETWRS SKEEKKIMAV W* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 4.0e-5 | 267 | 344 | 82 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-10 | 374 | 444 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 8.0e-24 | 374 | 457 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-79 | 37 | 353 | 320 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN62816.1 | 0 | 1 | 468 | 1 | 461 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_179534.1 | 0 | 14 | 463 | 1 | 450 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002275701.1 | 0 | 1 | 468 | 1 | 461 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310612.1 | 0 | 1 | 478 | 1 | 474 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530257.1 | 0 | 6 | 465 | 7 | 459 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 0 | 34 | 353 | 1 | 306 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1aq0_B | 0 | 34 | 353 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 34 | 353 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3ur8_B | 0 | 34 | 354 | 3 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3ur8_A | 0 | 34 | 354 | 3 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
