| Basic Information | |
|---|---|
| Species | Phaseolus vulgaris |
| Cazyme ID | Phvul.006G072800.1 |
| Family | CBM43 |
| Protein Properties | Length: 485 Molecular Weight: 52990.5 Isoelectric Point: 7.1529 |
| Chromosome | Chromosome/Scaffold: 06 Start: 19239981 End: 19243973 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 369 | 448 | 1.7e-25 |
| WCVVNNNKDLSNATASALEACANADCTALSPGGSCFNMSWPSNISYAFNSYYQQHDQRAESCDFGGLGLITTVDPSMDHC | |||
| GH17 | 26 | 348 | 0 |
| VGVNWGTMASHPLPPLKVVKLLKSNNINKVKLFDANSDVLQSLSGSNIAVTVGIPNTMLRSLNSSKKAADSWVHDNVTRYMPSGGSVTRIEYVAVGHEPF HKSYGEQFHPFLIGAAMNIQAALKKAKLDSKVKVVVPCSFDSFETGFNMSSEVHVRPDLNKTMTELLMFLGKLGSPFFVTISPFITHLESKNISLDFSLF RETAHPHNFNHKTYKNSFDLSYDTVVTALSSAGYPNMDIVVAKIGWPTDGAASASSNLAETFIKGLINHLHSNLGTPLRPHKPPLETYILSLLDEDQRSI ASGNFERHWGLFTFDGQAKYHVD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 485 Download |
| MPPISCLLLL TFLITTSTMG CVVGAVGVNW GTMASHPLPP LKVVKLLKSN NINKVKLFDA 60 NSDVLQSLSG SNIAVTVGIP NTMLRSLNSS KKAADSWVHD NVTRYMPSGG SVTRIEYVAV 120 GHEPFHKSYG EQFHPFLIGA AMNIQAALKK AKLDSKVKVV VPCSFDSFET GFNMSSEVHV 180 RPDLNKTMTE LLMFLGKLGS PFFVTISPFI THLESKNISL DFSLFRETAH PHNFNHKTYK 240 NSFDLSYDTV VTALSSAGYP NMDIVVAKIG WPTDGAASAS SNLAETFIKG LINHLHSNLG 300 TPLRPHKPPL ETYILSLLDE DQRSIASGNF ERHWGLFTFD GQAKYHVDLG QGSSSLVNAQ 360 NVEYLSSKWC VVNNNKDLSN ATASALEACA NADCTALSPG GSCFNMSWPS NISYAFNSYY 420 QQHDQRAESC DFGGLGLITT VDPSMDHCRF PIEIRISHAE FHRLCNFQWL ILLVTTLSAA 480 ALVV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0007 | 261 | 340 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 9.0e-15 | 368 | 436 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-30 | 368 | 450 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-57 | 26 | 348 | 324 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28434.1 | 0 | 25 | 477 | 22 | 477 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001130286.1 | 0 | 26 | 459 | 32 | 462 | hypothetical protein LOC100191380 [Zea mays] |
| RefSeq | NP_200656.2 | 0 | 17 | 459 | 17 | 453 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002269108.1 | 0 | 25 | 477 | 25 | 480 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313970.1 | 0 | 23 | 473 | 19 | 470 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 5.04467e-44 | 26 | 349 | 2 | 315 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3f55_C | 5.04467e-44 | 26 | 349 | 2 | 315 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3f55_B | 5.04467e-44 | 26 | 349 | 2 | 315 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3f55_A | 5.04467e-44 | 26 | 349 | 2 | 315 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3em5_D | 5.04467e-44 | 26 | 349 | 2 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
