Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s14_30V6.1 |
Family | CBM43 |
Protein Properties | Length: 508 Molecular Weight: 53500.7 Isoelectric Point: 5.1558 |
Chromosome | Chromosome/Scaffold: 14 Start: 149167 End: 150991 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 377 | 457 | 2.1e-28 |
WCVLNPIKDLSTLPANLDYACSRADCTPLTTGGSCSGLTLQQNASYAFNQYYQFNNQLKSACDFQGLAQVVTTDPSVGSCK | |||
GH17 | 35 | 352 | 0 |
LGVNWGTISHDPLPNNIVVKLLQDNNFAKVKLFDADPNVIESMRGTNLEVMVAITNDMLAAMAAGTDAAAAWVKQNVTAHLGSGGVNIKYVAVGNEPFLN GYNGKFTDVTYPALKNVQAALAAAGLAETVKAVVPCNADILSNNPLPSQQTFRSDLAPIMLNIAQALDSTKSPFVVNLYPFLSLVLGTNFPIDYAFFSGY STPLVDGTKTYDNVFDASYDGVVSALVTAGYPNMVVSVGEIGWPTDGNAYANITLAQKFNQQLVNHVESGKGTPLRPGKLEAYVFSLLDENAKSTLPGNF ERHWGVFNFDGSVKYLLD |
Full Sequence |
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Protein Sequence Length: 508 Download |
MVAVAGRQAL AFARVAAVVL LCITGWQLGK GNGELGVNWG TISHDPLPNN IVVKLLQDNN 60 FAKVKLFDAD PNVIESMRGT NLEVMVAITN DMLAAMAAGT DAAAAWVKQN VTAHLGSGGV 120 NIKYVAVGNE PFLNGYNGKF TDVTYPALKN VQAALAAAGL AETVKAVVPC NADILSNNPL 180 PSQQTFRSDL APIMLNIAQA LDSTKSPFVV NLYPFLSLVL GTNFPIDYAF FSGYSTPLVD 240 GTKTYDNVFD ASYDGVVSAL VTAGYPNMVV SVGEIGWPTD GNAYANITLA QKFNQQLVNH 300 VESGKGTPLR PGKLEAYVFS LLDENAKSTL PGNFERHWGV FNFDGSVKYL LDLTGGVSGT 360 QTRLIGAQNV PYYPSQWCVL NPIKDLSTLP ANLDYACSRA DCTPLTTGGS CSGLTLQQNA 420 SYAFNQYYQF NNQLKSACDF QGLAQVVTTD PSVGSCKFVI GVAESSTSTP SAPGSAGRSA 480 ASTSSPLPSL RILISIAAAA IVASLFP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.002 | 270 | 344 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-18 | 376 | 444 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 9.0e-33 | 376 | 458 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-59 | 35 | 352 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001754617.1 | 0 | 1 | 477 | 1 | 477 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001757439.1 | 0 | 10 | 478 | 6 | 473 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001762304.1 | 0 | 34 | 463 | 7 | 436 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001775842.1 | 0 | 12 | 476 | 12 | 476 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002525026.1 | 0 | 19 | 468 | 11 | 456 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 35 | 354 | 3 | 315 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 3ur8_A | 0 | 35 | 354 | 3 | 315 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 3ur7_B | 0 | 35 | 354 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 35 | 354 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0 | 35 | 354 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |