Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s157_11V6.1 |
Family | CBM43 |
Protein Properties | Length: 487 Molecular Weight: 51958.3 Isoelectric Point: 4.7301 |
Chromosome | Chromosome/Scaffold: 157 Start: 46287 End: 49133 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 367 | 444 | 2.3e-24 |
CVLNTSVIDRTNLTQNVDYACGIADCTALNNGSTCATLAEPASYAFNSYFQAMSQDPGACNFQGYAMIVTENPSQGAC | |||
GH17 | 25 | 341 | 0 |
LGVNWGNQAFNPLPPKDVVKLLQMNSVTKVKIFDANYDILKSLVGSGIEVMVAAPNYALYDLANNPNAATEWVKQNVTRFNFKGGVDIKWVAVGNEPFLT AYNGSYLNTTLPAFQNMQAALDAAGHTGVRAIIPFNADVLTNVKPSATTFKPEYIAQIGPMLEIMNRTGAPFCMNLYPYISLYMDSGYPVDYAFFSGTTS PNVDGAITYQNALDASLDGLASALSKAGYPSMPIMLGEIGWPTDGARSATVDLAGRYMQDMITHLQSGIGTPLRPNVFVEFYLFGLLDENSKSIAPGPFE RHWGVFYYDGVAKYPLN |
Full Sequence |
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Protein Sequence Length: 487 Download |
MARVALLSLL VLSMTASAAI CVGGLGVNWG NQAFNPLPPK DVVKLLQMNS VTKVKIFDAN 60 YDILKSLVGS GIEVMVAAPN YALYDLANNP NAATEWVKQN VTRFNFKGGV DIKWVAVGNE 120 PFLTAYNGSY LNTTLPAFQN MQAALDAAGH TGVRAIIPFN ADVLTNVKPS ATTFKPEYIA 180 QIGPMLEIMN RTGAPFCMNL YPYISLYMDS GYPVDYAFFS GTTSPNVDGA ITYQNALDAS 240 LDGLASALSK AGYPSMPIML GEIGWPTDGA RSATVDLAGR YMQDMITHLQ SGIGTPLRPN 300 VFVEFYLFGL LDENSKSIAP GPFERHWGVF YYDGVAKYPL NLASGTTNAA TAIKSLVNPP 360 YMAEQFCVLN TSVIDRTNLT QNVDYACGIA DCTALNNGST CATLAEPASY AFNSYFQAMS 420 QDPGACNFQG YAMIVTENPS QGACRFPISL VPTTGSSSGA PSWRLSSAAL TLALVLSSLG 480 VLWPIT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.008 | 257 | 333 | 82 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 5.0e-14 | 365 | 433 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-26 | 365 | 446 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-60 | 25 | 341 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ90287.1 | 0 | 20 | 475 | 23 | 480 | beta-1,3-glucanase, acidic [Coffea arabica] |
RefSeq | NP_001058984.1 | 0 | 28 | 450 | 28 | 451 | Os07g0168600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_001757439.1 | 0 | 10 | 464 | 15 | 473 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001772976.1 | 0 | 14 | 486 | 1 | 473 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001773368.1 | 0 | 22 | 482 | 24 | 483 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 25 | 343 | 2 | 316 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 3f55_C | 0 | 25 | 343 | 2 | 316 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 3f55_B | 0 | 25 | 343 | 2 | 316 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 3f55_A | 0 | 25 | 343 | 2 | 316 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 3em5_D | 0 | 25 | 343 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |