Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s162_17V6.1 |
Family | CBM43 |
Protein Properties | Length: 496 Molecular Weight: 54055.6 Isoelectric Point: 5.2408 |
Chromosome | Chromosome/Scaffold: 162 Start: 98657 End: 101620 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 371 | 449 | 1.3e-24 |
CVLNENADRTNLSQNVAFACSRTDCTPLYPGSSCGGLSAVQNASYSFNSYFQFQNQDPNACNFQGLGRITTENPSVGNC | |||
GH17 | 27 | 345 | 0 |
LGVNWGTISVNPLPPGYVVKMLQANGIKKVKLFDAAYDVIRALAGTDIEVMVAAPNNLLATLAGDPKAAEDWVKANVTSYNFKGGANIRWVAVGNEPFLT AYEGMYLNTTLPALRNIVNALAKAGQANTVRTIIPFNFDILNGAVKPSETRFKVEYLDQIRPMLQIFNSTGAPFSVNLYPFISKYQSPDFPLDYAFFEGS TSAVTDGTFIYKNALDASLDALISALTAEGYPAMEILLGEIGWPTDGNEFANPTLAGKYNQQLINHLQSKVGTPLRPNTFTEFYMFGLLDENIKSILPGP FERHWGMFYYDGVAKYPLD |
Full Sequence |
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Protein Sequence Length: 496 Download |
MAREPGVWRV VVVTLLFLVV SQTVNGLGVN WGTISVNPLP PGYVVKMLQA NGIKKVKLFD 60 AAYDVIRALA GTDIEVMVAA PNNLLATLAG DPKAAEDWVK ANVTSYNFKG GANIRWVAVG 120 NEPFLTAYEG MYLNTTLPAL RNIVNALAKA GQANTVRTII PFNFDILNGA VKPSETRFKV 180 EYLDQIRPML QIFNSTGAPF SVNLYPFISK YQSPDFPLDY AFFEGSTSAV TDGTFIYKNA 240 LDASLDALIS ALTAEGYPAM EILLGEIGWP TDGNEFANPT LAGKYNQQLI NHLQSKVGTP 300 LRPNTFTEFY MFGLLDENIK SILPGPFERH WGMFYYDGVA KYPLDLAAGT GAPPQTIKNA 360 EFPPYMSAQY CVLNENADRT NLSQNVAFAC SRTDCTPLYP GSSCGGLSAV QNASYSFNSY 420 FQFQNQDPNA CNFQGLGRIT TENPSVGNCR FIIGLTKYTP QTRPTSGTAA QSGILVLTIF 480 SLLVSSFRFW LDSAL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-5 | 143 | 337 | 207 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 6.0e-16 | 369 | 437 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-28 | 369 | 451 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-67 | 27 | 345 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001754617.1 | 0 | 9 | 470 | 14 | 477 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001757439.1 | 0 | 8 | 489 | 8 | 496 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001772976.1 | 0 | 24 | 483 | 9 | 469 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001773368.1 | 0 | 1 | 495 | 1 | 495 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001775842.1 | 0 | 10 | 480 | 18 | 489 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 27 | 335 | 1 | 301 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghr_A | 1.4013e-45 | 27 | 346 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 1.4013e-45 | 27 | 346 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 1.4013e-45 | 27 | 346 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3f55_D | 9.94922e-44 | 27 | 347 | 2 | 316 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |