Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s197_52V6.1 |
Family | CBM43 |
Protein Properties | Length: 510 Molecular Weight: 54576.1 Isoelectric Point: 4.9886 |
Chromosome | Chromosome/Scaffold: 197 Start: 237768 End: 240362 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 377 | 457 | 7.4e-26 |
WCVLKTTADLSLLPANLDYACARADCTPLFYGGSCSGLTLHQNASFAFNNYYQFNNQLQAACDFQSLAQVVNTDPSVGTCK | |||
GH17 | 35 | 352 | 0 |
VGVNWGTISSDPLSNDIVVQMLKDNNFVKVKLFDANSDVIESMRGTNLEVMIAITNEMLASMAASPDAAAAWVKANVTSHLGTGGVNIKYVAVGNEPFLN GYNGRYIDATLPALKNVQAALAAAGLVDTVKAVVPCNADILSDNPYPSQQTFRADLAPVMLGIAAALKSTNSPFVVNLYPFLNLVLQANFPIDFAFFSGF ATPIVDGTRVYTNVFDAGFDGVVGALNNAGYPNMAVIVGEIGWPTDGANYANIGLAQKFNQQLVNHLESGVGTPLRPGKLEAYLFGLLDENAKSTLPGNF ERHWGIFNFDGTIKYPLD |
Full Sequence |
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Protein Sequence Length: 510 Download |
MAGHRMQSRQ VFTSSVAVVA LCLVGWQMEM AVADVGVNWG TISSDPLSND IVVQMLKDNN 60 FVKVKLFDAN SDVIESMRGT NLEVMIAITN EMLASMAASP DAAAAWVKAN VTSHLGTGGV 120 NIKYVAVGNE PFLNGYNGRY IDATLPALKN VQAALAAAGL VDTVKAVVPC NADILSDNPY 180 PSQQTFRADL APVMLGIAAA LKSTNSPFVV NLYPFLNLVL QANFPIDFAF FSGFATPIVD 240 GTRVYTNVFD AGFDGVVGAL NNAGYPNMAV IVGEIGWPTD GANYANIGLA QKFNQQLVNH 300 LESGVGTPLR PGKLEAYLFG LLDENAKSTL PGNFERHWGI FNFDGTIKYP LDLTGGVTGR 360 QTSLVGSKNV PYYPHQWCVL KTTADLSLLP ANLDYACARA DCTPLFYGGS CSGLTLHQNA 420 SFAFNNYYQF NNQLQAACDF QSLAQVVNTD PSVGTCKFLI GVRPGNSQAI APPESSSSRS 480 GASLTVNWQY LLTFLSTIIY NCSQLLLFP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.003 | 270 | 344 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 6.0e-5 | 376 | 444 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-18 | 376 | 458 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-62 | 35 | 352 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001754617.1 | 0 | 12 | 476 | 12 | 476 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001757439.1 | 0 | 19 | 484 | 6 | 472 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001762304.1 | 0 | 28 | 464 | 1 | 437 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001775842.1 | 0 | 1 | 480 | 1 | 480 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002515573.1 | 0 | 6 | 469 | 1 | 466 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 35 | 353 | 3 | 314 | A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica |
PDB | 3ur8_A | 0 | 35 | 353 | 3 | 314 | A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica |
PDB | 3ur7_B | 0 | 35 | 353 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 35 | 353 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0 | 35 | 353 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |