| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s27_327V6.1 |
| Family | CBM43 |
| Protein Properties | Length: 498 Molecular Weight: 53914.4 Isoelectric Point: 5.7543 |
| Chromosome | Chromosome/Scaffold: 27 Start: 2251541 End: 2254194 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 372 | 450 | 1e-24 |
| CVLNTYADRTNLSENVAFACSRADCTPLFPGSSCAGLSLEQNASYSFNAYFQFQNQDPAACNFQGLASITTVDPSAGNC | |||
| GH17 | 28 | 346 | 0 |
| LGVNWGTMSVNPMPPGYVVKMLQANGIKKVKLFDADHDVVKSMAGTDIEVMVAAPNDLLFKLATLKGAADAWVKQNVTRFNFKGGVNIRWVAVGNEPFLT AYEGQYLNTTLPALKNVVDALAKAGHANTVRAIIPFNADILDGAPLPSATRFKAEYLDQILPMLQIFNSTNSPFSVNLYPFISKYQNPSFPLDYAFFGGT TSPLIDGSNTYTNALDASVDALIAALGAAGYPNMPVVLGEIGWPTDGNEYATRELAGTYNQQLINHLQSNKGTPMRPNTFTEFYMFGWLDENIKSILPGA FERHWGMFFYDGVAKYELN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 498 Download |
| MVGSRIAWCC VSMGMLLLMG ASQFVSGLGV NWGTMSVNPM PPGYVVKMLQ ANGIKKVKLF 60 DADHDVVKSM AGTDIEVMVA APNDLLFKLA TLKGAADAWV KQNVTRFNFK GGVNIRWVAV 120 GNEPFLTAYE GQYLNTTLPA LKNVVDALAK AGHANTVRAI IPFNADILDG APLPSATRFK 180 AEYLDQILPM LQIFNSTNSP FSVNLYPFIS KYQNPSFPLD YAFFGGTTSP LIDGSNTYTN 240 ALDASVDALI AALGAAGYPN MPVVLGEIGW PTDGNEYATR ELAGTYNQQL INHLQSNKGT 300 PMRPNTFTEF YMFGWLDENI KSILPGAFER HWGMFFYDGV AKYELNLAGG TDAPAQTLKN 360 AEYPPYMSAQ YCVLNTYADR TNLSENVAFA CSRADCTPLF PGSSCAGLSL EQNASYSFNA 420 YFQFQNQDPA ACNFQGLASI TTVDPSAGNC RFIIGLVKSK PSTSRSDAGS AFRPKNYNNG 480 IIVAISALFL SNLFCFS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.001 | 181 | 338 | 162 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 3.0e-13 | 370 | 439 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-27 | 370 | 452 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 6.0e-71 | 28 | 346 | 320 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001754617.1 | 0 | 6 | 471 | 10 | 476 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001757439.1 | 0 | 1 | 497 | 1 | 497 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001772976.1 | 0 | 21 | 473 | 5 | 451 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001773368.1 | 0 | 22 | 496 | 21 | 489 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001775842.1 | 0 | 6 | 467 | 19 | 481 | predicted protein [Physcomitrella patens subsp. patens] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 0 | 28 | 347 | 1 | 306 | A Chain A, Crystal Structure Of Galactose Oxidase Complexed With Azide |
| PDB | 1aq0_B | 0 | 28 | 347 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 28 | 347 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3f55_D | 1.4013e-45 | 28 | 348 | 2 | 316 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3f55_C | 1.4013e-45 | 28 | 348 | 2 | 316 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
