Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s54_130V6.1 |
Family | CBM43 |
Protein Properties | Length: 491 Molecular Weight: 52393.4 Isoelectric Point: 4.6335 |
Chromosome | Chromosome/Scaffold: 54 Start: 825636 End: 828422 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 380 | 460 | 8.4e-29 |
WCVLKPTADLSLLPANLDYACGSTDCTPLFSGGSCSGLTLQQNASYAFNNYYQFNNQLPSACDFQGLAQVTTTDPSSGTCK | |||
GH17 | 38 | 355 | 0 |
LGVNWGRISSDPLSNDVVVQMLKDNNFVKVKLFDANSEVIESMRGINLEVMVAITNDMLATIAASIDAAAAWVKANVTSHLGNNGVNIKYAAVGNEPFLT GYNGKYVDVTLPALKNVQAALAAAGLAETVKAVVPCNADILSDNSYPSQQTFRADLAPVMLDIVTALQSTNSPFVVNLYPFLNLVLQPTFPVDFAFFTGY NTPLVDGTRIYTNVFDASFDGVVVALNNAGYPNMDVIVGEIGWPTDGANYATIELAQKFNQQLVNHLESGVGTPLRPGKLEAYVFGLLDENAKSTLPGNF ERHWGIFNFDGTVKYPLD |
Full Sequence |
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Protein Sequence Length: 491 Download |
MVVMAGHQMH KRQVFSSVVG IVVLCLMARH METAVAELGV NWGRISSDPL SNDVVVQMLK 60 DNNFVKVKLF DANSEVIESM RGINLEVMVA ITNDMLATIA ASIDAAAAWV KANVTSHLGN 120 NGVNIKYAAV GNEPFLTGYN GKYVDVTLPA LKNVQAALAA AGLAETVKAV VPCNADILSD 180 NSYPSQQTFR ADLAPVMLDI VTALQSTNSP FVVNLYPFLN LVLQPTFPVD FAFFTGYNTP 240 LVDGTRIYTN VFDASFDGVV VALNNAGYPN MDVIVGEIGW PTDGANYATI ELAQKFNQQL 300 VNHLESGVGT PLRPGKLEAY VFGLLDENAK STLPGNFERH WGIFNFDGTV KYPLDLTGGV 360 DGTQTALVGS KNVPYYPRQW CVLKPTADLS LLPANLDYAC GSTDCTPLFS GGSCSGLTLQ 420 QNASYAFNNY YQFNNQLPSA CDFQGLAQVT TTDPSSGTCK FTIGVRPVGS QSIAAPGISQ 480 SQSSASPTVS * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 9.0e-5 | 270 | 347 | 82 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-7 | 379 | 447 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-22 | 379 | 461 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 8.0e-60 | 38 | 355 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001754617.1 | 0 | 1 | 477 | 1 | 474 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001757439.1 | 0 | 35 | 474 | 25 | 468 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001762304.1 | 0 | 31 | 467 | 1 | 437 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001773368.1 | 0 | 38 | 479 | 27 | 469 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001775842.1 | 0 | 4 | 483 | 1 | 480 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 38 | 356 | 3 | 314 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3ur8_A | 0 | 38 | 356 | 3 | 314 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3ur7_B | 0 | 38 | 356 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 38 | 356 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0 | 38 | 356 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |