| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_006647m |
| Family | CBM43 |
| Protein Properties | Length: 481 Molecular Weight: 51949.2 Isoelectric Point: 4.8049 |
| Chromosome | Chromosome/Scaffold: 05667 Start: 89790 End: 93630 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 365 | 444 | 1.8e-24 |
| WCVADPTKDLSGVTNHMRIACNFADCTTLNYGGSCNGIGAKGNISFAFNSYYQLQDQNAQSCDFDGLGMVTFLDPSVGDC | |||
| GH17 | 26 | 344 | 0 |
| IGVNWGTLSFRKLKPSTVVDLLKDNKIEKVKLFDADPDVLRALMGSGIQVMVGIPNEMLAAISSSTAVSDLWVRQNVSRYVVKDGVDIRYVAVGNEPFLS SYSGQFQSYVVPALQNLQQSLAKANLSGYVKLVVPCNADAYESSLPSQGAFRSDLTEIMTQLVSFLNSNGSPFVVNIYPFLSLYGSTDFPQDYAFFEGTA HSVTDGPNVYYNAFDGNFDTLVSALNKLGYGQMPIVIGEVGWPTDGAISANLTAARVFNQGLIDHVLSKQGTPLRPGAPPMDIYLFSLLDEGAKSTLPGN FERHWGVFSFDGQAKYPLN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 481 Download |
| MSGFSAAFLY LLVLVSGSCL VAESAIGVNW GTLSFRKLKP STVVDLLKDN KIEKVKLFDA 60 DPDVLRALMG SGIQVMVGIP NEMLAAISSS TAVSDLWVRQ NVSRYVVKDG VDIRYVAVGN 120 EPFLSSYSGQ FQSYVVPALQ NLQQSLAKAN LSGYVKLVVP CNADAYESSL PSQGAFRSDL 180 TEIMTQLVSF LNSNGSPFVV NIYPFLSLYG STDFPQDYAF FEGTAHSVTD GPNVYYNAFD 240 GNFDTLVSAL NKLGYGQMPI VIGEVGWPTD GAISANLTAA RVFNQGLIDH VLSKQGTPLR 300 PGAPPMDIYL FSLLDEGAKS TLPGNFERHW GVFSFDGQAK YPLNLGLGNK LLKNAKNVEY 360 LPSRWCVADP TKDLSGVTNH MRIACNFADC TTLNYGGSCN GIGAKGNISF AFNSYYQLQD 420 QNAQSCDFDG LGMVTFLDPS VGDCRFLVGV TDTGSSGFGT GPRWIIIWIL IIGGMWVFLI 480 * 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.006 | 256 | 336 | 81 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 5.0e-16 | 364 | 433 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-28 | 365 | 446 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-77 | 26 | 342 | 319 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB10499.1 | 0 | 6 | 480 | 35 | 502 | glucanase like protein [Arabidopsis thaliana] |
| EMBL | CAN82722.1 | 0 | 21 | 452 | 1 | 432 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002271875.1 | 0 | 23 | 456 | 36 | 469 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002329964.1 | 0 | 1 | 480 | 1 | 484 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525026.1 | 0 | 1 | 480 | 1 | 480 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 0 | 26 | 345 | 1 | 306 | X Chain X, Crystal Structure Of The Sixteen Heme Cytochrome From Desulfovibrio Gigas |
| PDB | 1aq0_B | 0 | 26 | 345 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 26 | 345 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3f55_D | 0 | 41 | 345 | 17 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3f55_C | 0 | 41 | 345 | 17 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
