Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_006709m |
Family | CBM43 |
Protein Properties | Length: 479 Molecular Weight: 53116.5 Isoelectric Point: 4.8214 |
Chromosome | Chromosome/Scaffold: 06877 Start: 10261 End: 12203 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 362 | 443 | 1.9e-27 |
WCVLNPDAIDFDDLPESINYACSLSDCTSLGYGSSCNHLSVEGNASYAFNMYYQVNDQKDWNCDFSGLAVITDKDPSDGDCE | |||
GH17 | 19 | 339 | 0 |
IGVNWGTMTTQLLPPEKVVHMLRQNGIRKLKLFEADERIMAALIGTDIEVMLAVPNYMLHLMSEDPAAAASWVDANVTSWLYTGGVNIKYVAVGNEPFLQ TYNGSYLQVTLPALRNIHQALDRDKVSSKVKVTVPFNADVYYSANPNQVPSAGDFRPEVRDLAIEIVQFLHSNDAPFTVNIYPFLSLYSDENFPVDFAFF DGTKNPIKDGGLVYNNVFDANFDTLVWALDKSGYPDMKIIVGEVGWPTDGDKNANIPNAKRFNQGLIQHVLSGKGTPARKGKIDVYLFSLIDENAKSIAP GSFERHWGLFEYDGKPKYELD |
Full Sequence |
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Protein Sequence Length: 479 Download |
MVLFVLCVRM SMASRVTGIG VNWGTMTTQL LPPEKVVHML RQNGIRKLKL FEADERIMAA 60 LIGTDIEVML AVPNYMLHLM SEDPAAAASW VDANVTSWLY TGGVNIKYVA VGNEPFLQTY 120 NGSYLQVTLP ALRNIHQALD RDKVSSKVKV TVPFNADVYY SANPNQVPSA GDFRPEVRDL 180 AIEIVQFLHS NDAPFTVNIY PFLSLYSDEN FPVDFAFFDG TKNPIKDGGL VYNNVFDANF 240 DTLVWALDKS GYPDMKIIVG EVGWPTDGDK NANIPNAKRF NQGLIQHVLS GKGTPARKGK 300 IDVYLFSLID ENAKSIAPGS FERHWGLFEY DGKPKYELDL SGLKEEKGLV PVEGVKYMYR 360 RWCVLNPDAI DFDDLPESIN YACSLSDCTS LGYGSSCNHL SVEGNASYAF NMYYQVNDQK 420 DWNCDFSGLA VITDKDPSDG DCEFPIMISH GHSLAQHGRL LDVLLRIAGG CLVFLGVM* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-6 | 257 | 331 | 76 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-18 | 361 | 431 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-34 | 362 | 444 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-80 | 19 | 339 | 324 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI28113.1 | 0 | 1 | 477 | 530 | 977 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189076.1 | 0 | 1 | 475 | 20 | 495 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002281500.1 | 0 | 1 | 475 | 12 | 482 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324967.1 | 0 | 19 | 454 | 9 | 445 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515573.1 | 0 | 1 | 478 | 12 | 489 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 19 | 340 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 19 | 341 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 19 | 341 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 19 | 341 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 19 | 341 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |