Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a006003m |
Family | CBM43 |
Protein Properties | Length: 462 Molecular Weight: 50648.3 Isoelectric Point: 4.8411 |
Chromosome | Chromosome/Scaffold: 3 Start: 3742753 End: 3745085 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 348 | 428 | 2.8e-22 |
WCVYNTDVKNLDKLPGNMDYACSRADCTSLNHVGPCSKLDQASRISYAFNIFFQMNAQDVESCEFDGMARIVEANASTGNC | |||
GH17 | 8 | 326 | 0 |
GVNWGTQASQNLHPSIIVQMLKDNNINKIKLFDSDSWVVKYFAGTGIDVMLGIPNNQLASLAKDYDNAKDWVKQNLTKHLYDGGVNIRYVAVGNEPFLKS YNGSNLATTFPALKNIQRAINEHGLGDKVKATIPQNADVYDSGTDGPSAGNFRSDIRDLMTQIVSFFQENGSPFLVNIYPFLSLYGNPDFPVEFAFFDGG AAPVVDGGISYTNMLDANLDTLVWSLKKAGATGVKVIIGEIGWPTDGDGSATVDLAKRFYDGLFKKMATKKGTPLYQEDIEYYLFSLTDENQKSVAPGDF ERHWGVFQYDGKPKFPMDF |
Full Sequence |
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Protein Sequence Length: 462 Download |
MAAADGMGVN WGTQASQNLH PSIIVQMLKD NNINKIKLFD SDSWVVKYFA GTGIDVMLGI 60 PNNQLASLAK DYDNAKDWVK QNLTKHLYDG GVNIRYVAVG NEPFLKSYNG SNLATTFPAL 120 KNIQRAINEH GLGDKVKATI PQNADVYDSG TDGPSAGNFR SDIRDLMTQI VSFFQENGSP 180 FLVNIYPFLS LYGNPDFPVE FAFFDGGAAP VVDGGISYTN MLDANLDTLV WSLKKAGATG 240 VKVIIGEIGW PTDGDGSATV DLAKRFYDGL FKKMATKKGT PLYQEDIEYY LFSLTDENQK 300 SVAPGDFERH WGVFQYDGKP KFPMDFKGTG NDKMPIAAKN VPYMESKWCV YNTDVKNLDK 360 LPGNMDYACS RADCTSLNHV GPCSKLDQAS RISYAFNIFF QMNAQDVESC EFDGMARIVE 420 ANASTGNCLF PLALEDSAGW KLGARVWPAT VLFGLALLSV F* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-6 | 201 | 317 | 121 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-10 | 347 | 416 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-22 | 347 | 430 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-79 | 8 | 326 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN62816.1 | 0 | 2 | 442 | 22 | 461 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_201284.1 | 0 | 6 | 434 | 27 | 455 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002275701.1 | 0 | 2 | 442 | 22 | 461 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310612.1 | 0 | 6 | 458 | 31 | 485 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530257.1 | 0 | 2 | 434 | 24 | 455 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 7 | 326 | 2 | 315 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 3f55_C | 0 | 7 | 326 | 2 | 315 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 3f55_B | 0 | 7 | 326 | 2 | 315 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 3f55_A | 0 | 7 | 326 | 2 | 315 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 3em5_D | 0 | 7 | 326 | 2 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO797198 | 444 | 6 | 447 | 0 |
GR142630 | 201 | 262 | 462 | 0 |
EX345626 | 310 | 88 | 395 | 0 |
CF207401 | 266 | 9 | 274 | 0 |
EX345865 | 292 | 88 | 377 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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