Basic Information | |
---|---|
Species | Mimulus guttatus |
Cazyme ID | mgv1a022774m |
Family | CBM43 |
Protein Properties | Length: 500 Molecular Weight: 54941.1 Isoelectric Point: 7.9202 |
Chromosome | Chromosome/Scaffold: 101 Start: 244455 End: 246972 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 363 | 442 | 5.2e-25 |
WCVVNNNKDLSNASALALEACGAADCTALSLGGSCFNLSWPGNISYAFNSYYQQRDQNSESCDFGGLGLITSVDPSDDAC | |||
GH17 | 20 | 342 | 0 |
IGVNWGTAASHPLPPHKVVELLKSNGIAKVKLSDADPLILQSLSGSNIRVTVGIPNSMLRGLNSSLKAAESWVHDNLTRFVSDGASRVLVDYVAVGEEPF LQTYGDEFHPFLVGAATNIQAALFKAKLSERVKVVTPCSFDAFTSDSNPLSKSRFRPDVNKTMLELVTFLNKHQSPFFVTVSPFQSYIKNKNLSLDFALF RPTPHAKNSTRKTYKNLFDLSYNTVVSSLSNSGFPQMEIVIGQIGWPTDGSPNATSSLAEEFTKGLINHLHSKSAKPSNNQDLPTEIYILSLLDEDQRNI STGNFERHWGVFTFDGQAKYQVD |
Full Sequence |
---|
Protein Sequence Length: 500 Download |
MSTKQYKFNW EHNLCREKGI GVNWGTAASH PLPPHKVVEL LKSNGIAKVK LSDADPLILQ 60 SLSGSNIRVT VGIPNSMLRG LNSSLKAAES WVHDNLTRFV SDGASRVLVD YVAVGEEPFL 120 QTYGDEFHPF LVGAATNIQA ALFKAKLSER VKVVTPCSFD AFTSDSNPLS KSRFRPDVNK 180 TMLELVTFLN KHQSPFFVTV SPFQSYIKNK NLSLDFALFR PTPHAKNSTR KTYKNLFDLS 240 YNTVVSSLSN SGFPQMEIVI GQIGWPTDGS PNATSSLAEE FTKGLINHLH SKSAKPSNNQ 300 DLPTEIYILS LLDEDQRNIS TGNFERHWGV FTFDGQAKYQ VDLGQGSKNL ANARDVQYLS 360 SKWCVVNNNK DLSNASALAL EACGAADCTA LSLGGSCFNL SWPGNISYAF NSYYQQRDQN 420 SESCDFGGLG LITSVDPSDD ACRFSIGLRT SSALSALLFA FVPRVAILRF QCSNFKDECG 480 QIRNFVLITS WPGVVLSQM* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0006 | 198 | 334 | 143 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-11 | 362 | 430 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-25 | 362 | 444 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-64 | 20 | 342 | 325 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF95444.1 | 0 | 20 | 470 | 35 | 477 | Glycosyl hydrolases family 17 protein, expressed [Oryza sativa (japonica cultivar-group)] |
EMBL | CBI28434.1 | 0 | 16 | 455 | 19 | 460 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_200656.2 | 0 | 18 | 455 | 24 | 455 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002269108.1 | 0 | 19 | 455 | 25 | 463 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313970.1 | 0 | 18 | 455 | 20 | 457 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 2e-36 | 20 | 343 | 2 | 315 | A Chain A, Crystal Structure Of Peroxiredoxin (Ahpc) From Amphibacillus Xylanus |
PDB | 3f55_C | 2e-36 | 20 | 343 | 2 | 315 | A Chain A, Crystal Structure Of Peroxiredoxin (Ahpc) From Amphibacillus Xylanus |
PDB | 3f55_B | 2e-36 | 20 | 343 | 2 | 315 | A Chain A, Crystal Structure Of Peroxiredoxin (Ahpc) From Amphibacillus Xylanus |
PDB | 3f55_A | 2e-36 | 20 | 343 | 2 | 315 | A Chain A, Crystal Structure Of Peroxiredoxin (Ahpc) From Amphibacillus Xylanus |
PDB | 3em5_D | 2e-36 | 20 | 343 | 2 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
GO978388 | 214 | 18 | 231 | 0 |
GT624769 | 288 | 137 | 419 | 0 |
HO797198 | 437 | 19 | 453 | 0 |
GR127072 | 187 | 271 | 457 | 0 |
GR127072 | 18 | 256 | 273 | 0.82 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|