Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna15460.1-v1.0-hybrid |
Family | CBM43 |
Protein Properties | Length: 483 Molecular Weight: 52052.1 Isoelectric Point: 4.8051 |
Chromosome | Chromosome/Scaffold: 6 Start: 13368318 End: 13370453 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 362 | 444 | 1.2e-23 |
WCVLSPSANLDDPEVPLSVSYACANADCTSLGYGTSCGNLDIRGNISYAFNSYYQIHDQLDTACRFPNLSTVTNSDPSTGDCK | |||
GH17 | 24 | 342 | 0 |
IGVNWGTQDTHAIPPASVVKMIKDNGIQKVKLFDADYNILNALSKSGLQVMVGIPNEMLSGLANSVAAAENWVSKNVSSYVSNGVDIRYAAVGNEPLLSA FNGSFLTTLFPALKNIQSALIKAGLSNQVKVTIPLNADVYDSGTSTKPSDGDFRADTKDLMLNIVQFLSDNGAAFTVNIYPFISLYNNPGFPADYAFFDG FSSPIDDNGKIYQNVFDANHDTLVWALAKNGFGNLSIIVGEIGWPTDGDQNANLQLAQRFNQGFMTRIKNNVGTPMRPGPVDAYLFSLVDEDAKSIQPGN FERHWGLFYFDGTPKYQLS |
Full Sequence |
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Protein Sequence Length: 483 Download |
MGLFRGLVVA LLCFNVLVGF VFGIGVNWGT QDTHAIPPAS VVKMIKDNGI QKVKLFDADY 60 NILNALSKSG LQVMVGIPNE MLSGLANSVA AAENWVSKNV SSYVSNGVDI RYAAVGNEPL 120 LSAFNGSFLT TLFPALKNIQ SALIKAGLSN QVKVTIPLNA DVYDSGTSTK PSDGDFRADT 180 KDLMLNIVQF LSDNGAAFTV NIYPFISLYN NPGFPADYAF FDGFSSPIDD NGKIYQNVFD 240 ANHDTLVWAL AKNGFGNLSI IVGEIGWPTD GDQNANLQLA QRFNQGFMTR IKNNVGTPMR 300 PGPVDAYLFS LVDEDAKSIQ PGNFERHWGL FYFDGTPKYQ LSLGTANALV GASGVKYLAK 360 KWCVLSPSAN LDDPEVPLSV SYACANADCT SLGYGTSCGN LDIRGNISYA FNSYYQIHDQ 420 LDTACRFPNL STVTNSDPST GDCKFRIMIE PSEYSSSSVN VRAGALGKPL CLILVVLLYA 480 FL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-5 | 256 | 334 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-11 | 361 | 432 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-26 | 361 | 445 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-76 | 24 | 342 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 24 | 343 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghr_A | 0 | 24 | 332 | 1 | 295 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 0 | 24 | 332 | 1 | 295 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 24 | 332 | 1 | 295 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3ur8_B | 0 | 24 | 343 | 3 | 314 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |