Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna19854.1-v1.0-hybrid |
Family | CBM43 |
Protein Properties | Length: 483 Molecular Weight: 52518.2 Isoelectric Point: 5.2186 |
Chromosome | Chromosome/Scaffold: 3 Start: 1387288 End: 1390079 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 364 | 443 | 1.6e-25 |
WCVADPARDLSAVESHMKLACSVADCTTLGYGGSCNGIGAKGNISYAFNSYYQVQMQKEQSCDFDGLGMVTFLDPSMGEC | |||
GH17 | 25 | 343 | 0 |
IGVNWGILSFHRLKPSTVVDLLKDNKISKVKLFDADPDSLEALMGSGIQVMVGISNDMLPFLSSSADASDLWVRRNVSRYVVKNGVDIRYVAVGNEPFLT SYSGQYQPYVMPALLNLQQSLAKVNLASYVKLVVPCNADAYEAALPSQGAFRPELTEIMTQLVSFLNSNGSPFVVNIYPFLSLYGSSDFPQEYAFFEGTS HSVTDGSAVYNNAFDGNFDTLVAALSKLGYGQMPIVIGEVGWPTDGAISANLTAAKTFNQGLIKNVLSNKGTPLRPGVPPMDVYLFGLLDEGTKSTLPGT FERHWGIFSFDGQAKYPLN |
Full Sequence |
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Protein Sequence Length: 483 Download |
MVEARLVCLI VMWCLTAPRV AEAAIGVNWG ILSFHRLKPS TVVDLLKDNK ISKVKLFDAD 60 PDSLEALMGS GIQVMVGISN DMLPFLSSSA DASDLWVRRN VSRYVVKNGV DIRYVAVGNE 120 PFLTSYSGQY QPYVMPALLN LQQSLAKVNL ASYVKLVVPC NADAYEAALP SQGAFRPELT 180 EIMTQLVSFL NSNGSPFVVN IYPFLSLYGS SDFPQEYAFF EGTSHSVTDG SAVYNNAFDG 240 NFDTLVAALS KLGYGQMPIV IGEVGWPTDG AISANLTAAK TFNQGLIKNV LSNKGTPLRP 300 GVPPMDVYLF GLLDEGTKST LPGTFERHWG IFSFDGQAKY PLNLGLGSRQ LINARNVEYL 360 PSRWCVADPA RDLSAVESHM KLACSVADCT TLGYGGSCNG IGAKGNISYA FNSYYQVQMQ 420 KEQSCDFDGL GMVTFLDPSM GECRFLVGVT ASSATSFSQL QHSSAIVWIW ILISWRVWIC 480 VI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0006 | 198 | 335 | 139 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-17 | 363 | 432 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-29 | 364 | 445 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-71 | 25 | 343 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 25 | 344 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 4.06377e-44 | 25 | 344 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 4.06377e-44 | 25 | 344 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 4.06377e-44 | 25 | 344 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 4.06377e-44 | 25 | 344 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |