Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna21134.1-v1.0-hybrid |
Family | CBM43 |
Protein Properties | Length: 461 Molecular Weight: 50953.1 Isoelectric Point: 7.0092 |
Chromosome | Chromosome/Scaffold: 1 Start: 17062470 End: 17064644 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 351 | 427 | 1.4e-21 |
WCVVNSDVKNGTLLKTDLNYACSQADCTSLGSGRSCDLDMQGKVSYAYNSLFQSKDQDVRTCNFNGKGTITKTDPSK | |||
GH17 | 26 | 328 | 0 |
LGVNWGGMASHPLDPNNVVKMLKDNGIKKVKLFDAEPSTMKALSGSGFSVIVGIPNDKLASISSDYKHAQEWVKENITKYDHNGGVDIRFGFTTFPALQN IQKALDAAGTRQKIKAIVPFNADVYEASSGKPSDGSFRKDIRVEMLKILGLLKNNKSPFFVNIYPFISLQQSSTFPREFAFFDGTSQPVQDNNNQYTNVF DANLDTLVCALKKVGYQDLDIVIGEAGWPTDGDKNANPTLAKKFYDGLMKKLAKAEGTPLQKGYLEVYLFGLTDEDQKSVAPGDFERHWGIFSYDGKPKF AMD |
Full Sequence |
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Protein Sequence Length: 461 Download |
MVRVLLLLTY VVSLMLVNLT DEAQGLGVNW GGMASHPLDP NNVVKMLKDN GIKKVKLFDA 60 EPSTMKALSG SGFSVIVGIP NDKLASISSD YKHAQEWVKE NITKYDHNGG VDIRFGFTTF 120 PALQNIQKAL DAAGTRQKIK AIVPFNADVY EASSGKPSDG SFRKDIRVEM LKILGLLKNN 180 KSPFFVNIYP FISLQQSSTF PREFAFFDGT SQPVQDNNNQ YTNVFDANLD TLVCALKKVG 240 YQDLDIVIGE AGWPTDGDKN ANPTLAKKFY DGLMKKLAKA EGTPLQKGYL EVYLFGLTDE 300 DQKSVAPGDF ERHWGIFSYD GKPKFAMDLT GKGNDQMLKG VQGVQYMDKQ WCVVNSDVKN 360 GTLLKTDLNY ACSQADCTSL GSGRSCDLDM QGKVSYAYNS LFQSKDQDVR TCNFNGKGTI 420 TKTDPSKELP LKVQHGLDLN EFANRELVMR LKIVLEVLVE * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-5 | 204 | 320 | 122 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 6.0e-13 | 350 | 419 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-24 | 350 | 426 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-68 | 26 | 328 | 317 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 4.00001e-41 | 24 | 329 | 1 | 314 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3ur8_A | 4.00001e-41 | 24 | 329 | 1 | 314 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3ur7_B | 4.00001e-41 | 24 | 329 | 1 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 4.00001e-41 | 24 | 329 | 1 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 3e-40 | 24 | 329 | 1 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |