| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi5g10700.1 |
| Family | CE8 |
| Protein Properties | Length: 466 Molecular Weight: 50256.4 Isoelectric Point: 8.9969 |
| Chromosome | Chromosome/Scaffold: 5 Start: 14029419 End: 14030816 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 165 | 459 | 0 |
| PCDYSTVQAAVNAAPNNTYGHFVIAVAAGVYEENVIIPFEKTNILLVGEGMGATIITASRSVGIEGLGTYDTATVAVTGDGFRARDITFENSAGAGAHQA VTFRSDSDQSVLENVEFRGHQDTLYARTMRHFYRRCHITGTVDFIFGNAAAMFEECVIKTVPRAEGARKSARNVVAANGRIDPGQTTGFVFRNCSVDGNK EFMLLFQAKPQSYQLYLGRPWKEYSRTVYVSCYLGKVVMPEGWLPWRGDFALRSLYYGEFDSRGPGANYTSRVKWSSQTPDKHVGFYSVESFIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 466 Download |
| MPRTHHPHVL PRRRRLLPIA AAAAALVLLA LLILLPAAPP GAPASLLRAA IAAHPSAASY 60 AHPCADHLSL SLHRLRAALS ALESGDQPAA LHLASASLQC QYDCSHLLSL PAFPSQTLTS 120 RFLNSLTPQT LIASPKLSAA SAAAAFPAMV RPTATVCKPS PAAKPCDYST VQAAVNAAPN 180 NTYGHFVIAV AAGVYEENVI IPFEKTNILL VGEGMGATII TASRSVGIEG LGTYDTATVA 240 VTGDGFRARD ITFENSAGAG AHQAVTFRSD SDQSVLENVE FRGHQDTLYA RTMRHFYRRC 300 HITGTVDFIF GNAAAMFEEC VIKTVPRAEG ARKSARNVVA ANGRIDPGQT TGFVFRNCSV 360 DGNKEFMLLF QAKPQSYQLY LGRPWKEYSR TVYVSCYLGK VVMPEGWLPW RGDFALRSLY 420 YGEFDSRGPG ANYTSRVKWS SQTPDKHVGF YSVESFIQGH VWIAY* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02713 | PLN02713 | 9.0e-96 | 167 | 463 | 306 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 1.0e-99 | 167 | 463 | 300 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02201 | PLN02201 | 9.0e-100 | 167 | 463 | 304 | + probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 9.0e-131 | 166 | 459 | 300 | + Pectinesterase. | ||
| PLN02708 | PLN02708 | 2.0e-156 | 155 | 463 | 310 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAE02750.2 | 0 | 43 | 465 | 53 | 480 | OSJNBa0006B20.19 [Oryza sativa (japonica cultivar-group)] |
| EMBL | CAH67582.1 | 0 | 43 | 465 | 51 | 478 | H0315A08.12 [Oryza sativa (indica cultivar-group)] |
| GenBank | EAY94221.1 | 0 | 43 | 465 | 53 | 480 | hypothetical protein OsI_15995 [Oryza sativa Indica Group] |
| RefSeq | NP_001140854.1 | 0 | 1 | 465 | 1 | 471 | hypothetical protein LOC100272930 [Zea mays] |
| RefSeq | XP_002446513.1 | 0 | 1 | 465 | 1 | 468 | hypothetical protein SORBIDRAFT_06g017280 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 167 | 463 | 14 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 167 | 463 | 18 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 3uw0_A | 6e-17 | 167 | 329 | 43 | 224 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 0.000000000000001 | 154 | 385 | 6 | 245 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 0.000000000000001 | 154 | 385 | 6 | 245 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
