| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10000564m |
| Family | CE8 |
| Protein Properties | Length: 581 Molecular Weight: 63730.9 Isoelectric Point: 7.8821 |
| Chromosome | Chromosome/Scaffold: 6 Start: 2974887 End: 2977163 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 270 | 571 | 0 |
| ATVCKDGKCAYKTVQDAVNAAPVGNGKRKFVIKISEGVYEETVIVPFEKKNVVFIGDGMGKTVITGSLNAGMPGITTYNTATVGVVGDGFMARDLTFQNT AGPDAHQAVAFRSDSDFSLLQNCEFLGNQDTLYAHGLRQFYKNCRIQGNVDFIFGNSAAVFQDCEILIAPRQLKPEKGEKNAVTAQGRIDPSQSTGFVFL NCLINGTEEYMKLFNANPKVHKNYLGRPWKDYSRTVFIGCNLETLITPDGWLPWSGDFALKTLYYGEAKNTGPGSDRSQRVSWSSEIPDEHVHVYSVANF IQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 581 Download |
| MSSSKLHHPH RRKLPIRCFC LLILAMSSIL ILLFSLFLFS SPSSSSRHHH SHHNSRRSPS 60 GDTPPAYPSQ SPSAQIRLAC NATRYPDQCV SSLSEPGLVP PDSKPIQIIH SAISISFQNL 120 KTAQSKIKSI VDSSVGNLNR TNAAKTCLQL LSYSEHRTQS TDQALTRGKI KDARAWMSAA 180 LVYQYDSWSA LKYVNDTSQV GETMSFLDAL IHLSSNALSM MVSYDNFGDN VASWTSPATE 240 RDGFWDKTGP VLGSDTGPNL GFPSGLKEDA TVCKDGKCAY KTVQDAVNAA PVGNGKRKFV 300 IKISEGVYEE TVIVPFEKKN VVFIGDGMGK TVITGSLNAG MPGITTYNTA TVGVVGDGFM 360 ARDLTFQNTA GPDAHQAVAF RSDSDFSLLQ NCEFLGNQDT LYAHGLRQFY KNCRIQGNVD 420 FIFGNSAAVF QDCEILIAPR QLKPEKGEKN AVTAQGRIDP SQSTGFVFLN CLINGTEEYM 480 KLFNANPKVH KNYLGRPWKD YSRTVFIGCN LETLITPDGW LPWSGDFALK TLYYGEAKNT 540 GPGSDRSQRV SWSSEIPDEH VHVYSVANFI QADEWASMYA * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02745 | PLN02745 | 5.0e-109 | 76 | 577 | 530 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02990 | PLN02990 | 3.0e-110 | 76 | 575 | 519 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 1.0e-116 | 120 | 575 | 475 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 2.0e-170 | 269 | 573 | 308 | + Pectinesterase. | ||
| PLN02708 | PLN02708 | 0 | 76 | 578 | 505 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB09534.1 | 0 | 1 | 580 | 1 | 577 | pectin methylesterase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_196538.1 | 0 | 61 | 580 | 30 | 551 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | NP_568991.2 | 0 | 9 | 580 | 25 | 602 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002275218.1 | 0 | 45 | 575 | 39 | 568 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002281640.1 | 0 | 26 | 575 | 1 | 550 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 254 | 552 | 3 | 281 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 269 | 575 | 4 | 303 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 2e-17 | 275 | 498 | 14 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 2e-17 | 275 | 498 | 14 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 2e-17 | 275 | 498 | 14 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
