| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s76_125V6.1 |
| Family | CE8 |
| Protein Properties | Length: 562 Molecular Weight: 60855.1 Isoelectric Point: 8.9924 |
| Chromosome | Chromosome/Scaffold: 76 Start: 859976 End: 861791 |
| Description | pectin methylesterase 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 251 | 545 | 0 |
| AIVAKDGSGKYKSIQAAIGAAPKNSSKKWVIHVKAGVWSEYVEVPKSAKNMVIMGDGIGDTIVTGSRSVVGSNLTTFATATFYVIAPNFLGLDFTVRNTA GPWNHQAVALKVQGDKTAFWRCSFEAYQDTMYAHSNRQFYKDCTISGKVDYIFGNAAAVFQTCTLLGRVPMPGQQNTFTAQGRTTNSQNTGFSFHKCIVD AAPELKSLKNQVVSSYFGRPWKEFSRTVFLTCSVGSVISAEGWLPWDGTFALKTLVYGEYKNIGAGSDTSRRVKWSTQIQDVRVANKFTVNSFIT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 562 Download |
| MFGLHDAIWF AVAVSLLASL AQAGDGNVVA LEAPRMVRLM CNQAHDRDSC VASLAAHPLA 60 ATSGPRDLAS IGIQTALGGV GSFYTYATSL RSGASGRGKE SALTACEFVL QDSQDYLKQA 120 LARLATLNPL KFKQQIEDTL TWMSSALTNH ITCLDGFSEV GGGLRDSILT RSMSVTTLIA 180 NSVSLVGSIS SFGVASLDNV DSHNRRLLQS ELSDSLVYEL GNDDFPKWMR PADRKLMQAG 240 GDRTRLTIVN AIVAKDGSGK YKSIQAAIGA APKNSSKKWV IHVKAGVWSE YVEVPKSAKN 300 MVIMGDGIGD TIVTGSRSVV GSNLTTFATA TFYVIAPNFL GLDFTVRNTA GPWNHQAVAL 360 KVQGDKTAFW RCSFEAYQDT MYAHSNRQFY KDCTISGKVD YIFGNAAAVF QTCTLLGRVP 420 MPGQQNTFTA QGRTTNSQNT GFSFHKCIVD AAPELKSLKN QVVSSYFGRP WKEFSRTVFL 480 TCSVGSVISA EGWLPWDGTF ALKTLVYGEY KNIGAGSDTS RRVKWSTQIQ DVRVANKFTV 540 NSFITGETWL PQTTIIYNPQ L* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02745 | PLN02745 | 2.0e-133 | 22 | 550 | 544 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 2.0e-136 | 37 | 561 | 542 | + pectinesterase | ||
| PLN02301 | PLN02301 | 4.0e-139 | 34 | 561 | 541 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 8.0e-141 | 37 | 561 | 533 | + putative pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 5.0e-156 | 250 | 547 | 300 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK24761.1 | 0 | 22 | 557 | 36 | 551 | unknown [Picea sitchensis] |
| GenBank | ABQ42392.1 | 0 | 37 | 561 | 74 | 594 | pectin methylesterase-like protein [Taiwania cryptomerioides] |
| GenBank | ACN40984.1 | 0 | 34 | 557 | 78 | 596 | unknown [Picea sitchensis] |
| RefSeq | XP_001765495.1 | 0 | 237 | 561 | 1 | 325 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002320714.1 | 0 | 37 | 561 | 28 | 514 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 250 | 558 | 8 | 316 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 248 | 557 | 2 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 1e-19 | 250 | 418 | 32 | 220 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 3e-19 | 247 | 530 | 2 | 324 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 3e-19 | 247 | 530 | 2 | 324 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
