| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si010057m |
| Family | CE8 |
| Protein Properties | Length: 460 Molecular Weight: 49901 Isoelectric Point: 9.7783 |
| Chromosome | Chromosome/Scaffold: 7 Start: 20636304 End: 20640401 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 159 | 453 | 0 |
| PCRYSTVQAAVDAAPNYTAGHFVIAVAAGTYKENVVIPYEKTNILLVGEGRGATVITASRSVGIDGLGTFDTATVAVIGDGFRARDITFENNAGAGAHQA VAFRSDSDRSVLENVEFRGHQDTLYARTMRQLYRRCHIMGTVDFIFGNAAAVFEECVIKTVPRAEGVRKTARNVVAANGRIDPGQTTGFVFQNCTVDGNK EFLELFRTKPQSYRLYLGRPWKEYARTLYVSCYLGTVIRPEGWLPWRGDFAFRTLYYGEFDSRGPGANRTARVEWSNQTPEQHVKLYSLENFIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 460 Download |
| MPRGHHHRRG RLLPLVAAAA ALLLLALLVL LPAAPPAGGP ASLLRAAVAA HPSPAAYGRP 60 CADHLALSLR RLRAALASLE AGDVPAALHL ASASLQCQYD CSHLLSLPAF RSHPLTSRFL 120 NSLAPRTLTA APKPSSAAAF PVRIRPDATV CKSNSGAKPC RYSTVQAAVD AAPNYTAGHF 180 VIAVAAGTYK ENVVIPYEKT NILLVGEGRG ATVITASRSV GIDGLGTFDT ATVAVIGDGF 240 RARDITFENN AGAGAHQAVA FRSDSDRSVL ENVEFRGHQD TLYARTMRQL YRRCHIMGTV 300 DFIFGNAAAV FEECVIKTVP RAEGVRKTAR NVVAANGRID PGQTTGFVFQ NCTVDGNKEF 360 LELFRTKPQS YRLYLGRPWK EYARTLYVSC YLGTVIRPEG WLPWRGDFAF RTLYYGEFDS 420 RGPGANRTAR VEWSNQTPEQ HVKLYSLENF IQGHQWIAY* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02745 | PLN02745 | 4.0e-97 | 143 | 457 | 323 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 3.0e-99 | 141 | 457 | 320 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02201 | PLN02201 | 6.0e-102 | 144 | 457 | 321 | + probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 4.0e-132 | 147 | 453 | 310 | + Pectinesterase. | ||
| PLN02708 | PLN02708 | 1.0e-158 | 140 | 457 | 319 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAE02750.2 | 0 | 40 | 459 | 53 | 480 | OSJNBa0006B20.19 [Oryza sativa (japonica cultivar-group)] |
| EMBL | CAH67582.1 | 0 | 40 | 459 | 51 | 478 | H0315A08.12 [Oryza sativa (indica cultivar-group)] |
| GenBank | EAY94221.1 | 0 | 40 | 459 | 53 | 480 | hypothetical protein OsI_15995 [Oryza sativa Indica Group] |
| RefSeq | NP_001140854.1 | 0 | 1 | 459 | 1 | 471 | hypothetical protein LOC100272930 [Zea mays] |
| RefSeq | XP_002446513.1 | 0 | 1 | 459 | 1 | 468 | hypothetical protein SORBIDRAFT_06g017280 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 144 | 457 | 5 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 144 | 457 | 1 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 4e-16 | 161 | 323 | 43 | 224 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1qjv_B | 4e-16 | 147 | 379 | 5 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 4e-16 | 147 | 379 | 5 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
