Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10025415m |
Family | GH5 |
Protein Properties | Length: 507 Molecular Weight: 56332 Isoelectric Point: 5.3048 |
Chromosome | Chromosome/Scaffold: 7 Start: 20472102 End: 20474601 |
Description | |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 220 | 492 | 1.26117e-44 |
LQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPAPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAVPGSQNGNEHSATRDGFQEWGDSNIADTV AVIDFLAARYCNRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQ NIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHW |
Full Sequence |
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Protein Sequence Length: 507 Download |
MAYDSYANVV SSLFLFSCVI SLSLAQNADI KLPLRAVNLG NWLVTEGWMK PSRFDDIPNK 60 DLLDGTQVQF MSTKFQKYIA AESGGGTIVV ANRTSASGWE TFRLWRVNET FYNFRVNNKQ 120 FIGLENQGQG NGLVAVSNTA GYSETFQIVR KDGDSSRVRL SASNGMFIQA ISETRLTADY 180 GSSSWDDSDP SVFKLNIVST LRGEYQITNG FGPDKAPQVL QDHWDSYITD EDFKFLSSNG 240 INAVRIPVGW WIANDPAPPK PFVGGSSKVL DNAFDWAEKY GVKVIVDLHA VPGSQNGNEH 300 SATRDGFQEW GDSNIADTVA VIDFLAARYC NRPSLAAIEL INEPLAPGVA LDTLKSYYKA 360 GYDAVRKYTS TAYVIMSNRL GPADHKELLS FASGLSRVVI DVHYYNLFSN NFNGLNVQQN 420 IDYVNNQRAS DLGAVTTSNG PLTFVGEWTC EWNVKDASKQ DYQRFANAQL DVYGRATFGW 480 AYWAHKCEAN HWSLKWMIEN GYIKLV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00257 | Fascin | 0.0007 | 76 | 179 | 104 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
pfam00150 | Cellulase | 2.0e-16 | 223 | 484 | 269 | + Cellulase (glycosyl hydrolase family 5). | ||
COG2730 | BglC | 6.0e-31 | 186 | 502 | 354 | + Endoglucanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN74231.1 | 0 | 28 | 505 | 137 | 607 | hypothetical protein [Vitis vinifera] |
EMBL | CBI18831.1 | 0 | 1 | 506 | 1 | 506 | unnamed protein product [Vitis vinifera] |
EMBL | CBI33033.1 | 0 | 6 | 505 | 6 | 505 | unnamed protein product [Vitis vinifera] |
EMBL | CBI33035.1 | 0 | 1 | 486 | 1 | 486 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002306319.1 | 0 | 35 | 503 | 1 | 481 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1eqp_A | 4.00001e-40 | 204 | 501 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
PDB | 1eqc_A | 6e-40 | 204 | 501 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
PDB | 1cz1_A | 6e-40 | 204 | 501 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |