| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10026955m |
| Family | GH5 |
| Protein Properties | Length: 499 Molecular Weight: 57395.8 Isoelectric Point: 7.6393 |
| Chromosome | Chromosome/Scaffold: 7 Start: 20468505 End: 20471090 |
| Description | |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH5 | 203 | 484 | 0 |
| NGYGPDKAAKFMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQ EWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKRYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASNLSRVVIDVHFYNLFW DNFNKMSVQQNIDYIYRQRSSDLRNVTTPDGPLSFVGEWCCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKCHLNH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 499 Download |
| MPILFSFYLS WVLFCSLASP NSVNLPLKAP SLGNWLVTEG WMEPNMFYGI KNNDLLDGTQ 60 GQLISTKLKK YLTAENGSET ILMANHNSSS ASSWQTFRLW RINETFYNFR LSNKQFIGLE 120 NQGNKLVAVS ATEKFPEPFQ ITRKNGEPHR VRFRASNGYF LQAKSEMQVT ADYKGPSTWE 180 ENDPSVFNMT IVSTMHGEYQ ITNGYGPDKA AKFMRDHWKS YITEEDFKFM SQNGLNAVRI 240 PVGWWIAYDP KPPKPFVGGS LQALDNAFRW AQKYGMKVIV DLHALRVSQN GSPHSGSRDG 300 FQEWSDSDIQ ETVAIIDFLA SRYADHPSLV AIELMNEPKA PDLKLDSLKR YYKAGYDTVR 360 KYSSSAYVIL SNRLGGEWSE LLSFASNLSR VVIDVHFYNL FWDNFNKMSV QQNIDYIYRQ 420 RSSDLRNVTT PDGPLSFVGE WCCEWEAEGA SKRDYQRFAE AQLDVYGRAT FGWAYWAYKC 480 HLNHWSLRWM IENNYIKL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00257 | Fascin | 0.0006 | 69 | 181 | 116 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| cd00257 | Fascin | 0.0003 | 108 | 173 | 66 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam02449 | Glyco_hydro_42 | 8.0e-8 | 216 | 361 | 167 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam00150 | Cellulase | 2.0e-18 | 217 | 478 | 275 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 2.0e-29 | 186 | 495 | 345 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN74231.1 | 0 | 25 | 498 | 141 | 607 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI18831.1 | 0 | 1 | 498 | 7 | 505 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI33033.1 | 0 | 4 | 498 | 15 | 505 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI33035.1 | 0 | 4 | 479 | 15 | 486 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002309987.1 | 0 | 42 | 498 | 1 | 455 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1eqp_A | 5e-38 | 198 | 479 | 45 | 360 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1eqc_A | 1e-37 | 198 | 479 | 45 | 360 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1cz1_A | 1e-37 | 198 | 479 | 45 | 360 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
| PDB | 2pb1_A | 1e-37 | 198 | 479 | 51 | 366 | A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Unhydrolysed And Covalently Linked 2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside At 1.9 A |
| PDB | 2pbo_A | 1e-37 | 198 | 479 | 51 | 366 | A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A |
