Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.I00543.1 |
Family | GH5 |
Protein Properties | Length: 542 Molecular Weight: 60693.4 Isoelectric Point: 5.724 |
Chromosome | Chromosome/Scaffold: 9 Start: 11251442 End: 11256581 |
Description | |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 211 | 511 | 5.60519e-45 |
YQLANGYGHSKAKEVLQKHRSTFITIEDFSFLYRHRINTVRIPVGWWIAFDHNPPAPFIEGSLEALDNAFTWATSYNIKCIIDLHAAPGSQNGMEHSASR DGTTGWPTSPDYISKTLDVIDFLAKRYAKHPALLGIELLNEPSAASVPLDILVSYYRQGYEVVRKYSSSAYVIMCQRIGNADPLELYQANIGSHNIVVDL HYYNLFDTFFVNMSSVDNIQFIYQSREAQLKALNGSNGLLVFIGEWVNEWNVTSGSQAEYQDFGKAQLEVYNAASFGWAYWTLKNDRQHWDFEWNIRNNY L |
Full Sequence |
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Protein Sequence Length: 542 Download |
MLLKAALSMD RAMSRWVGAF LLSCWLVFRT AFCVEGLHRD AKVRGVNLGG WLVIEGWIKP 60 SLFDGIPNGD MLDGTQVQLK SVNLQKYVCA ENGGGTTISV NRDAASLWET FTLWRVSEFT 120 FQFRSSSGQF LTCEGEGCSV FATAKTPSAT ETFYIERNDS KIHIKLSTGA YLQATTANQL 180 TADYPGEPGW DDDNAATFLM TIVANNLHGD YQLANGYGHS KAKEVLQKHR STFITIEDFS 240 FLYRHRINTV RIPVGWWIAF DHNPPAPFIE GSLEALDNAF TWATSYNIKC IIDLHAAPGS 300 QNGMEHSASR DGTTGWPTSP DYISKTLDVI DFLAKRYAKH PALLGIELLN EPSAASVPLD 360 ILVSYYRQGY EVVRKYSSSA YVIMCQRIGN ADPLELYQAN IGSHNIVVDL HYYNLFDTFF 420 VNMSSVDNIQ FIYQSREAQL KALNGSNGLL VFIGEWVNEW NVTSGSQAEY QDFGKAQLEV 480 YNAASFGWAY WTLKNDRQHW DFEWNIRNNY LQLGESPGRQ FASQLVILAS AVACLFLHNT 540 L* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00257 | Fascin | 0.0007 | 74 | 155 | 82 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
cd00257 | Fascin | 2.0e-5 | 123 | 188 | 67 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
cd00257 | Fascin | 2.0e-10 | 75 | 183 | 110 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
pfam00150 | Cellulase | 6.0e-19 | 247 | 496 | 255 | + Cellulase (glycosyl hydrolase family 5). | ||
COG2730 | BglC | 3.0e-24 | 206 | 509 | 334 | + Endoglucanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0030674 | protein binding, bridging |
GO:0051015 | actin filament binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI33153.1 | 0 | 1 | 541 | 52 | 592 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002262875.1 | 0 | 1 | 541 | 40 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310872.1 | 0 | 43 | 515 | 1 | 475 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002438060.1 | 0 | 17 | 529 | 6 | 527 | hypothetical protein SORBIDRAFT_10g007500 [Sorghum bicolor] |
RefSeq | XP_002533566.1 | 0 | 34 | 541 | 8 | 515 | conserved hypothetical protein [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1eqp_A | 1e-29 | 210 | 416 | 45 | 252 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
PDB | 1eqp_A | 0.005 | 43 | 77 | 9 | 43 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
PDB | 3n9k_A | 1e-29 | 210 | 416 | 50 | 257 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
PDB | 3n9k_A | 0.005 | 43 | 77 | 14 | 48 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
PDB | 1eqc_A | 2e-29 | 210 | 416 | 45 | 252 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CO087274 | 297 | 137 | 432 | 0 |
JG854517 | 250 | 222 | 471 | 0 |
CO114350 | 238 | 168 | 405 | 0 |
EY770527 | 251 | 96 | 345 | 0 |
EX167089 | 260 | 235 | 494 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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