| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01030530001 |
| Family | GT19 |
| Protein Properties | Length: 433 Molecular Weight: 48192.4 Isoelectric Point: 9.4392 |
| Chromosome | Chromosome/Scaffold: 12 Start: 6519186 End: 6524292 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT19 | 10 | 390 | 0 |
| VFIVSGEVSGDTIGSRLMASLKGISPFPIRFAGVGGPMMSKQGLKPLFPMEDIAVMGIWELLPHLNKFRMRLKETIEAAFLFQPHVVLTIDSKGFSFRFL KQLRARYSQQGLVSPVHHHFVAPSFWAWKGGEARLKGLTEFVDHVFCILPYEEEVCRSNGLAATFVGHPILEDVLELNLEKNTPQSEWKVKGNSEDFRSK NGIAPGATVISLLPGSRLQEVTRMLSIFSNTVELLKHSFSELTTIIHVAPNQHVKDYISRTTYNWPVSVKLIPGGSPHLKYDALSASRVALCTSGTVAVE MQLARLPCVVAYRAHFLTEWFICWKAKIPFISIPNILLDSAIIPEALLQACTPAKLASLLMKLTLDEGLREKQIVAAEKVL | |||
| Full Sequence |
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| Protein Sequence Length: 433 Download |
| MAAKDSELRV FIVSGEVSGD TIGSRLMASL KGISPFPIRF AGVGGPMMSK QGLKPLFPME 60 DIAVMGIWEL LPHLNKFRMR LKETIEAAFL FQPHVVLTID SKGFSFRFLK QLRARYSQQG 120 LVSPVHHHFV APSFWAWKGG EARLKGLTEF VDHVFCILPY EEEVCRSNGL AATFVGHPIL 180 EDVLELNLEK NTPQSEWKVK GNSEDFRSKN GIAPGATVIS LLPGSRLQEV TRMLSIFSNT 240 VELLKHSFSE LTTIIHVAPN QHVKDYISRT TYNWPVSVKL IPGGSPHLKY DALSASRVAL 300 CTSGTVAVEM QLARLPCVVA YRAHFLTEWF ICWKAKIPFI SIPNILLDSA IIPEALLQAC 360 TPAKLASLLM KLTLDEGLRE KQIVAAEKVL SLLSPPQKII ENRMPQDLRW KSPDYTPSMI 420 GASTILYYAK PR* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK01021 | lpxB | 4.0e-38 | 11 | 401 | 398 | + lipid-A-disaccharide synthase; Reviewed | ||
| TIGR00215 | lpxB | 4.0e-49 | 10 | 375 | 371 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 3.0e-71 | 10 | 409 | 402 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| PRK00025 | lpxB | 2.0e-96 | 8 | 393 | 403 | + lipid-A-disaccharide synthase; Reviewed | ||
| COG0763 | LpxB | 8.0e-97 | 8 | 383 | 376 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28885.1 | 0 | 1 | 432 | 1 | 432 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001140462.1 | 0 | 2 | 430 | 33 | 463 | hypothetical protein LOC100272521 [Zea mays] |
| RefSeq | NP_178535.2 | 0 | 2 | 430 | 34 | 454 | transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002458499.1 | 0 | 2 | 430 | 13 | 443 | hypothetical protein SORBIDRAFT_03g034785 [Sorghum bicolor] |
| RefSeq | XP_002528957.1 | 0 | 2 | 431 | 40 | 469 | Lipid-A-disaccharide synthase, putative [Ricinus communis] |
| Metabolic Pathways | |||
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| Pathway Name | Reaction | EC | Protein Name |
| lipid IVA biosynthesis | LIPIDADISACCHARIDESYNTH-RXN | EC-2.4.1.182 | lipid-A-disaccharide synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EY717263 | 273 | 47 | 319 | 0 |
| EE622357 | 258 | 57 | 314 | 0 |
| EC969794 | 171 | 263 | 433 | 0 |
| EX686418 | 259 | 170 | 428 | 0 |
| EY717263 | 44 | 305 | 348 | 0.000006 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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