| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma02g11180.1 |
| Family | GT19 |
| Protein Properties | Length: 482 Molecular Weight: 53785.2 Isoelectric Point: 9.4781 |
| Chromosome | Chromosome/Scaffold: 02 Start: 9365565 End: 9371178 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT19 | 57 | 437 | 0 |
| VFLVAGEVSGDSIASRLMASLKILSPLPIRFAGVGGVKMTSEGLQSLFPIEDISVMGLWELLPHLYRIRVKLNETVKAAALFEPHVVLTIDSKGFSFRFL KQLRARYRQKKLHSPAHFHYVAPSFWAWKGGETRLRGLAEFVDHLLCILPNEDKICRLNGLCATFVGHPVLEDVLELNLRNNSSIHEWKAEGNGEDFRIK HAVPAGATIISLLPGSRMQEVSRMLPIFSNTVELMKDMVPQLMTIIHVAPNEHVENFIADAVHRWPVPVVLIPGGTTQLRYDAFSASRAALCTSGTVAVE LQLARLPCVVAYRAHILTEWYIWYKAKIQYISLTNILLDKAIIPEALFQSCKPLNLALLLKDLLHDDGCREEQIIAAQKIL | |||
| Full Sequence |
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| Protein Sequence Length: 482 Download |
| MLSKWIPPIS LGAKSLLRRK CNLNPNPNIP RVQWFSVSSS KAAPMIEMAA RDGELRVFLV 60 AGEVSGDSIA SRLMASLKIL SPLPIRFAGV GGVKMTSEGL QSLFPIEDIS VMGLWELLPH 120 LYRIRVKLNE TVKAAALFEP HVVLTIDSKG FSFRFLKQLR ARYRQKKLHS PAHFHYVAPS 180 FWAWKGGETR LRGLAEFVDH LLCILPNEDK ICRLNGLCAT FVGHPVLEDV LELNLRNNSS 240 IHEWKAEGNG EDFRIKHAVP AGATIISLLP GSRMQEVSRM LPIFSNTVEL MKDMVPQLMT 300 IIHVAPNEHV ENFIADAVHR WPVPVVLIPG GTTQLRYDAF SASRAALCTS GTVAVELQLA 360 RLPCVVAYRA HILTEWYIWY KAKIQYISLT NILLDKAIIP EALFQSCKPL NLALLLKDLL 420 HDDGCREEQI IAAQKILKLL WPSERIKLNL LQQNLKTCAD YTPSAVAALT ILNHGKPMTS 480 I* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK01021 | lpxB | 7.0e-33 | 58 | 401 | 354 | + lipid-A-disaccharide synthase; Reviewed | ||
| TIGR00215 | lpxB | 8.0e-47 | 57 | 409 | 354 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 1.0e-69 | 57 | 445 | 389 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| PRK00025 | lpxB | 4.0e-87 | 55 | 477 | 432 | + lipid-A-disaccharide synthase; Reviewed | ||
| COG0763 | LpxB | 8.0e-90 | 55 | 409 | 357 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28885.1 | 0 | 48 | 477 | 1 | 431 | unnamed protein product [Vitis vinifera] |
| GenBank | EEC71491.1 | 0 | 45 | 476 | 34 | 470 | hypothetical protein OsI_03760 [Oryza sativa Indica Group] |
| RefSeq | NP_178535.2 | 0 | 38 | 476 | 23 | 454 | transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002458499.1 | 0 | 45 | 472 | 9 | 439 | hypothetical protein SORBIDRAFT_03g034785 [Sorghum bicolor] |
| RefSeq | XP_002528957.1 | 0 | 31 | 477 | 25 | 469 | Lipid-A-disaccharide synthase, putative [Ricinus communis] |
| Metabolic Pathways | |||
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| Pathway Name | Reaction | EC | Protein Name |
| lipid IVA biosynthesis | LIPIDADISACCHARIDESYNTH-RXN | EC-2.4.1.182 | lipid-A-disaccharide synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GW893403 | 256 | 1 | 256 | 0 |
| CO981702 | 235 | 248 | 482 | 0 |
| DW017982 | 259 | 11 | 264 | 0 |
| AW596265 | 177 | 198 | 374 | 0 |
| EY717263 | 258 | 95 | 352 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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