| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10035357 |
| Family | GT19 |
| Protein Properties | Length: 446 Molecular Weight: 49124.2 Isoelectric Point: 9.3272 |
| Chromosome | Chromosome/Scaffold: 151 Start: 408266 End: 410286 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT19 | 42 | 398 | 0 |
| VFLVAGEVSGDAIGSRLMSSLKKLSPFPVRFSGVGGSMMCKEGLESLFPIEDISVMGLWELLPHLNKFRVRLRETVDAAVLFRPHFVVTVDSKGFSVHFL KQLRGSSKSPVHFHYVAQSFWAWKAGEARLKGLTGFVDHLFCILPNEVAICLLNGLATKFVGHPVLEDLLDLNSGKQEWRIQGNPDDFLSRFGISKDAKV ISLLPGSRLQEVTRMLPIFRKAMDELQHSFSDLFTVIHVAPNQDVEDFVGRVVNKWPAPAVLVPGGDSILKYDAFSASKVALCTSGTVAVELQLAWLPCA VAYRAHILTEWFVRHKAKIQSISLSNILMDSPAVPESLFQSCTPTNLAAILAELLVR | |||
| Full Sequence |
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| Protein Sequence Length: 446 Download |
| MLLRAFGAAK NYHPACAGLS WLHIRRHFSV SSSAAKDGEL RVFLVAGEVS GDAIGSRLMS 60 SLKKLSPFPV RFSGVGGSMM CKEGLESLFP IEDISVMGLW ELLPHLNKFR VRLRETVDAA 120 VLFRPHFVVT VDSKGFSVHF LKQLRGSSKS PVHFHYVAQS FWAWKAGEAR LKGLTGFVDH 180 LFCILPNEVA ICLLNGLATK FVGHPVLEDL LDLNSGKQEW RIQGNPDDFL SRFGISKDAK 240 VISLLPGSRL QEVTRMLPIF RKAMDELQHS FSDLFTVIHV APNQDVEDFV GRVVNKWPAP 300 AVLVPGGDSI LKYDAFSASK VALCTSGTVA VELQLAWLPC AVAYRAHILT EWFVRHKAKI 360 QSISLSNILM DSPAVPESLF QSCTPTNLAA ILAELLVRGR ETPAGGTDCS CRESNQAPVS 420 SRREFSKPRM FMKMQNGIPL IALRV* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK01021 | lpxB | 2.0e-30 | 43 | 377 | 342 | + lipid-A-disaccharide synthase; Reviewed | ||
| TIGR00215 | lpxB | 3.0e-46 | 42 | 399 | 358 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 1.0e-63 | 42 | 396 | 355 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| PRK00025 | lpxB | 2.0e-90 | 40 | 396 | 359 | + lipid-A-disaccharide synthase; Reviewed | ||
| COG0763 | LpxB | 7.0e-93 | 40 | 396 | 359 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28885.1 | 0 | 34 | 395 | 2 | 372 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001140462.1 | 0 | 30 | 396 | 29 | 403 | hypothetical protein LOC100272521 [Zea mays] |
| RefSeq | NP_178535.2 | 0 | 29 | 408 | 29 | 412 | transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002458499.1 | 0 | 30 | 396 | 9 | 383 | hypothetical protein SORBIDRAFT_03g034785 [Sorghum bicolor] |
| RefSeq | XP_002528957.1 | 0 | 22 | 396 | 23 | 411 | Lipid-A-disaccharide synthase, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EY717263 | 306 | 78 | 373 | 0 |
| EE622357 | 253 | 89 | 336 | 0 |
| FY429474 | 238 | 29 | 260 | 0 |
| EY663066 | 213 | 149 | 357 | 0 |
| EY663066 | 64 | 85 | 148 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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