| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g016179m |
| Family | GT19 |
| Protein Properties | Length: 395 Molecular Weight: 43609.1 Isoelectric Point: 8.826 |
| Chromosome | Chromosome/Scaffold: 00067 Start: 451787 End: 454396 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT19 | 34 | 391 | 0 |
| VFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLL KQLRARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNK YSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAVE LQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLTH | |||
| Full Sequence |
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| Protein Sequence Length: 395 Download |
| MGLFALQWQR RNMSASSRSR SVIEGAIKDG ELRVFIVAGE VSGDSIGSRL MSAMKKLAPL 60 PVSFSGVGGS MMSEQGMKSL FPMEDIAVMG IWELLPHIYK FRVRLKETIE AALLFRPHAV 120 VTVDSKGFSF RLLKQLRARY SHERLNGPAH FHYVAPSFWA WKGGEARLKN LAAFVDHILC 180 ILPNEEAICR LNGLAATFVG HPVVEDCLEL NLGKGPEPCE LKMEGNSEDF KNKYSVPSGA 240 TVISLLPGSR LQEVARMLPI FAKTVELLKD SFPELITVIH VAPNRHVENY ITGLIQKWPV 300 PSILVPGGSS NLKYDAFSAS RVALCTSGTV AVELQLARLP CVVAYRAHFL TEWFIRYKAK 360 IPYISLPNIL LDSPIIPEAL LQACTPDTLT HLLM* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK01021 | lpxB | 2.0e-33 | 35 | 378 | 347 | + lipid-A-disaccharide synthase; Reviewed | ||
| TIGR00215 | lpxB | 1.0e-44 | 34 | 389 | 360 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 4.0e-68 | 34 | 386 | 353 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| COG0763 | LpxB | 4.0e-93 | 32 | 394 | 365 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| PRK00025 | lpxB | 2.0e-93 | 32 | 394 | 363 | + lipid-A-disaccharide synthase; Reviewed | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28885.1 | 0 | 26 | 394 | 2 | 370 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001140462.1 | 0 | 4 | 389 | 6 | 395 | hypothetical protein LOC100272521 [Zea mays] |
| RefSeq | NP_178535.2 | 0 | 4 | 393 | 12 | 394 | transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002458499.1 | 0 | 22 | 389 | 9 | 375 | hypothetical protein SORBIDRAFT_03g034785 [Sorghum bicolor] |
| RefSeq | XP_002528957.1 | 0 | 2 | 394 | 18 | 408 | Lipid-A-disaccharide synthase, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EY717263 | 256 | 74 | 329 | 0 |
| EY663066 | 237 | 124 | 358 | 0 |
| EE622357 | 258 | 81 | 338 | 0 |
| EY663066 | 70 | 74 | 143 | 2e-29 |
| EY717263 | 44 | 329 | 372 | 0.00000004 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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