| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s98_156V6.1 |
| Family | GT19 |
| Protein Properties | Length: 481 Molecular Weight: 52612.1 Isoelectric Point: 9.3764 |
| Chromosome | Chromosome/Scaffold: 98 Start: 890280 End: 894221 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT19 | 88 | 456 | 0 |
| ILVSTGDVMGDIHGAALVRALIDAAGAEKVEVEVYAMGGKRMKDAGAVMIGDNTGISSIGLLEALPLIIPALRIQANVRKFLKSNPPDIVVLMDYPGINI PFGKYVKKEFGCKVVYYIPPNEWLWNTSRTGAITDACDTILSVYPAEADYFRKAGGHVVEVGHPLLDYYSPTRTRTEAREALGYGEKDLVILLMPASRAQ ELRHVWPIIASAARLLLHRILALKGQHRLHFIVPSVLPNGEHILEQSFEEFGLTGYASLWHGDTKILMSAADLAITKSGSVNLELTLHSVPQVVVYKLDK ATAWIARNIFKLSVKYISLINLILDEQVVPEFIQDAADPVKVANSAFDLLSLTDSKYRNMVLDGYTKLM | |||
| Full Sequence |
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| Protein Sequence Length: 481 Download |
| MALCRVPTLG FKQTTSVAAG RRQSLNTVDG LRIARIRQVG RFLSLGGDTT WSNGFQMQPR 60 QGQQGVVASA VEGKFVAVPE AQPKPLRILV STGDVMGDIH GAALVRALID AAGAEKVEVE 120 VYAMGGKRMK DAGAVMIGDN TGISSIGLLE ALPLIIPALR IQANVRKFLK SNPPDIVVLM 180 DYPGINIPFG KYVKKEFGCK VVYYIPPNEW LWNTSRTGAI TDACDTILSV YPAEADYFRK 240 AGGHVVEVGH PLLDYYSPTR TRTEAREALG YGEKDLVILL MPASRAQELR HVWPIIASAA 300 RLLLHRILAL KGQHRLHFIV PSVLPNGEHI LEQSFEEFGL TGYASLWHGD TKILMSAADL 360 AITKSGSVNL ELTLHSVPQV VVYKLDKATA WIARNIFKLS VKYISLINLI LDEQVVPEFI 420 QDAADPVKVA NSAFDLLSLT DSKYRNMVLD GYTKLMPLLG KPGVSKRTAQ YILDSLNSDR 480 * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14089 | PRK14089 | 4.0e-25 | 175 | 426 | 258 | + ipid-A-disaccharide synthase; Provisional | ||
| TIGR00215 | lpxB | 1.0e-65 | 88 | 474 | 393 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 9.0e-72 | 88 | 470 | 384 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| COG0763 | LpxB | 2.0e-85 | 85 | 477 | 394 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| PRK00025 | lpxB | 8.0e-110 | 85 | 478 | 395 | + lipid-A-disaccharide synthase; Reviewed | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001767930.1 | 0 | 1 | 480 | 1 | 480 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | YP_001015581.1 | 0 | 86 | 476 | 1 | 389 | lipid-A-disaccharide synthase [Prochlorococcus marinus str. NATL1A] |
| RefSeq | YP_001803246.1 | 0 | 86 | 473 | 1 | 381 | lipid-A-disaccharide synthase [Cyanothece sp. ATCC 51142] |
| RefSeq | YP_001866406.1 | 0 | 86 | 474 | 1 | 382 | lipid-A-disaccharide synthase [Nostoc punctiforme PCC 73102] |
| RefSeq | YP_292099.1 | 0 | 86 | 476 | 1 | 389 | lipid-A-disaccharide synthase [Prochlorococcus marinus str. NATL2A] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lipid IVA biosynthesis | LIPIDADISACCHARIDESYNTH-RXN | EC-2.4.1.182 | lipid-A-disaccharide synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| FC359156 | 268 | 196 | 463 | 0 |
| FC359155 | 209 | 273 | 481 | 0 |
| EX373143 | 187 | 84 | 270 | 0 |
| EX329732 | 183 | 84 | 266 | 0 |
| GR953892 | 178 | 238 | 415 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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