Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr5g022510.1 |
Family | AA2 |
Protein Properties | Length: 333 Molecular Weight: 37592 Isoelectric Point: 9.4809 |
Chromosome | Chromosome/Scaffold: 5 Start: 8623621 End: 8627186 |
Description | ascorbate peroxidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 17 | 244 | 0 |
VRRDLRSFITNKKCAPLMLRLAWHDAGTYDAKTRTGGPNGSIRNQQELNHAANKGLKTAVELCEEVKVKHPKVSYADLYQLAGVVAVEVTGGPTIQFVPG RKDSLESPQEGRLPDAKQGASHLREIFYRMGLTDKDIVALSGGHTLGKAHKDRSNFEGQWTRDPLKFDNSYFVELMKLESNDLLKLPTDKALVDDPAFRK YVELYAKDENAFFRDYATSHKKLSELGF |
Full Sequence |
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Protein Sequence Length: 333 Download |
MAKYAVDAEY VKEIEEVRRD LRSFITNKKC APLMLRLAWH DAGTYDAKTR TGGPNGSIRN 60 QQELNHAANK GLKTAVELCE EVKVKHPKVS YADLYQLAGV VAVEVTGGPT IQFVPGRKDS 120 LESPQEGRLP DAKQGASHLR EIFYRMGLTD KDIVALSGGH TLGKAHKDRS NFEGQWTRDP 180 LKFDNSYFVE LMKLESNDLL KLPTDKALVD DPAFRKYVEL YAKDENAFFR DYATSHKKLS 240 ELGFNPSCSY RSQLAKAALG MVIASTVVVL GYLLDWLERR ANNAKVAGSK PAWVIKRRCR 300 GSNPGHPRDR REYLPLYYND YLMIKSCYLF FL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00314 | plant_peroxidase_like | 1.0e-60 | 15 | 241 | 255 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
PLN02364 | PLN02364 | 3.0e-101 | 6 | 244 | 240 | + L-ascorbate peroxidase 1 | ||
PLN02879 | PLN02879 | 5.0e-108 | 6 | 244 | 239 | + L-ascorbate peroxidase | ||
cd00691 | ascorbate_peroxidase | 2.0e-151 | 8 | 246 | 246 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. | ||
PLN02608 | PLN02608 | 6.0e-180 | 1 | 273 | 281 | + L-ascorbate peroxidase |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAB52954.1 | 0 | 1 | 256 | 1 | 256 | ascorbate peroxidase [Gossypium hirsutum] |
GenBank | AAL35365.1 | 0 | 1 | 254 | 1 | 254 | AF442387_1 ascorbate peroxidase [Capsicum annuum] |
GenBank | ABA10744.1 | 0 | 1 | 280 | 1 | 283 | cytosolic ascorbate peroxidase isoform 4 [Solanum lycopersicum] |
DDBJ | BAB64351.1 | 0 | 1 | 249 | 1 | 249 | peroxisomal ascorbate peroxidase [Cucurbita cv. Kurokawa Amakuri] |
RefSeq | XP_002327746.1 | 0 | 1 | 280 | 1 | 286 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2xj6_A | 0 | 6 | 244 | 7 | 246 | B Chain B, Rubisco From Galdieria Partita |
PDB | 2xih_A | 0 | 6 | 244 | 7 | 246 | B Chain B, Rubisco From Galdieria Partita |
PDB | 2xif_A | 0 | 6 | 244 | 7 | 246 | A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii |
PDB | 2xi6_A | 0 | 6 | 244 | 7 | 246 | A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii |
PDB | 2ghk_X | 0 | 6 | 244 | 19 | 258 | A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DW153278 | 277 | 1 | 273 | 0 |
DW115153 | 277 | 1 | 273 | 0 |
DY824874 | 274 | 1 | 270 | 0 |
DY808196 | 274 | 1 | 270 | 0 |
DY820313 | 272 | 6 | 273 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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