| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb02g000300.1 |
| Family | AA1 |
| Protein Properties | Length: 563 Molecular Weight: 60338.6 Isoelectric Point: 10.6747 |
| Chromosome | Chromosome/Scaffold: 2 Start: 184630 End: 187528 |
| Description | laccase 7 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 133 | 554 | 0 |
| TYGALIIRPRGRGSYPFPRPYGEATILLGEWWNTSVVDVERQAFLKGAGPSNSVALTINGLIGAAGGGASAENNAAAAAHHHHQYQLTVEPGRTYLLRII NAALNYQLFFKVANHSFTVVAADACYTAGPLPHRRHRHRAGSDGGRAHARRRPPGPPLLLYMAAQVYQSLANATYSATTTALLTYQDHLQQPPPPPALMP TMPAFNDSATAQRFYASLTGLLQDGAPAVAVPLHVDTRMLVTFGLGVMPCAPAQTLCNRTLGSVAASMNNVSFQFPTAMSLLEAHMRGAPDGVFTRDFPD RPPVMFDFTGDGTTANRSLMFTSKGTKNTAILGAENHPVHLHGFNFFVLAQGTGNFNNYNLVNPQQRNTVAVPAAGWAVIRFTANNPGVWIMHCHLDAHL PFGLAMAFEVDDGPTPDAVLPP | |||
| Full Sequence |
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| Protein Sequence Length: 563 Download |
| MAYPITVSAA RAWRQRPHQT HVGNLSVRAA ERMGQSQVIT AVNGQFPGPK GAGPRRRHGG 60 GARRQPVPLQ REHPLARHPA APLQLGGRAK HGVAVPHPTR RRHLHVPLQR HRPGGHASCG 120 GTPTSPSSAP PSTYGALIIR PRGRGSYPFP RPYGEATILL GEWWNTSVVD VERQAFLKGA 180 GPSNSVALTI NGLIGAAGGG ASAENNAAAA AHHHHQYQLT VEPGRTYLLR IINAALNYQL 240 FFKVANHSFT VVAADACYTA GPLPHRRHRH RAGSDGGRAH ARRRPPGPPL LLYMAAQVYQ 300 SLANATYSAT TTALLTYQDH LQQPPPPPAL MPTMPAFNDS ATAQRFYASL TGLLQDGAPA 360 VAVPLHVDTR MLVTFGLGVM PCAPAQTLCN RTLGSVAASM NNVSFQFPTA MSLLEAHMRG 420 APDGVFTRDF PDRPPVMFDF TGDGTTANRS LMFTSKGTKN TAILGAENHP VHLHGFNFFV 480 LAQGTGNFNN YNLVNPQQRN TVAVPAAGWA VIRFTANNPG VWIMHCHLDA HLPFGLAMAF 540 EVDDGPTPDA VLPPPPPDYP RC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02604 | PLN02604 | 0.004 | 217 | 258 | 42 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 3.0e-25 | 390 | 541 | 174 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| PLN02604 | PLN02604 | 2.0e-25 | 390 | 541 | 176 | + oxidoreductase | ||
| pfam07731 | Cu-oxidase_2 | 4.0e-31 | 429 | 543 | 132 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| TIGR03389 | laccase | 2.0e-108 | 137 | 543 | 429 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEE66417.1 | 0 | 21 | 552 | 2 | 537 | hypothetical protein OsJ_22767 [Oryza sativa Japonica Group] |
| Swiss-Prot | Q69L99 | 0 | 18 | 552 | 35 | 573 | LAC14_ORYSJ RecName: Full=Laccase-14; AltName: Full=Benzenediol:oxygen oxidoreductase 14; AltName: Full=Urishiol oxidase 14; AltName: Full=Diphenol oxidase 14; Flags: Precursor |
| RefSeq | XP_002308196.1 | 0 | 18 | 562 | 27 | 562 | laccase 110a [Populus trichocarpa] |
| RefSeq | XP_002461291.1 | 0 | 1 | 562 | 1 | 562 | hypothetical protein SORBIDRAFT_02g000300 [Sorghum bicolor] |
| RefSeq | XP_002527888.1 | 0 | 21 | 562 | 3 | 540 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 3e-29 | 35 | 540 | 20 | 521 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 1asq_A | 3e-29 | 35 | 540 | 20 | 521 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 1asp_B | 3e-29 | 35 | 540 | 20 | 521 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 1asp_A | 3e-29 | 35 | 540 | 20 | 521 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 1aso_B | 3e-29 | 35 | 540 | 20 | 521 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CI142885 | 185 | 382 | 542 | 0 |
| EG377960 | 201 | 363 | 542 | 0 |
| FE968600 | 231 | 337 | 543 | 0 |
| EG384947 | 231 | 337 | 543 | 0 |
| DT757310 | 230 | 338 | 543 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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